Phragmites australis (common reed): 133919669
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Entry
133919669 CDS
T10575
Name
(RefSeq) clustered mitochondria protein-like
KO
K03255
protein TIF31
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
paua03012
]
133919669
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133919669
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
CLU_N
TPR_NPHP3
GSKIP_dom
Motif
Other DBs
NCBI-GeneID:
133919669
NCBI-ProteinID:
XP_062220117
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All DBs
Position
5:complement(40535185..40548783)
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AA seq
1403 aa
AA seq
DB search
MAGKSKGGRNKGKAQGASQAVSAEPEVPVTDEPEVVNPENGVVSEPPAADGGAADVEKGN
GDVAVAAQSAKKPVEGELHLYPVPVKTQSGEKLELQLSPEDSVIDVKQFLLDAPETCFYT
CYNLILHTKDGSIHQLEDYNEISEIADITSGGCSLEMVAGIYDERSIRLHLRRVRELLSL
STLHVSLSTSLALQQDSAQGKSADGGKTAIHELDGLNFLEDTTGALTYLLASAPAEIKCV
DSITSSSFNPPPSYRRLHGDLIYIDVVTLEGNEYCITGSSKSFYVNCSSGSILDPRPSKQ
VLEASTLVGLLQKISAKFKKGFREVLDHRASAHPFENVQSLLPVTSWLGAYPVPEHKRDA
ARAEDSVVLSYGTELIGMQRDWNEELQSCREFPHGNPQERILRGRALYKVTCDFVDAAVK
GAVGVINRCIPPINPTDPECFHMYVHNNIFFSFAVDSDYEHISKDHKPDCQNGSSRSIKA
CSTDVGAKPDKNHVDSNAVANSKPEELHGVSDNSSDASAEAQLADSEQATYASANNDLKG
TKAYQEADISGLYNLAMAIIDYRGHRVVAQSIIPGILQGDKSDSLLYGSVDNGKKISWNE
SFHSKVVEAAKRLHLKEHVVLDGSANPVKLAATVECKGIVGSDDRHYILDLMRVTPRDSN
YIGQENRFCVLRPELVASFVEAESTKQFPKQKVPDTPEESNVQVASTSDATATSVEEDDK
SEESSAPRAAENDDSSAEILFNPNVFTEYKLAGSPEEIAADEELVKKAGTYLLDIVIPKF
VQDLCSLNVSPTDGQTLTDVLHLHGINVRYLGKIAGMIKHLPHLWDLFSAEIIVRSAKHV
IKEILRQSPDHDIGPAIAHFLNCFVGKVLVASTKGSLGSTQLKTQKGQENSQTHKSTKGQ
KLSHGAASASGKGLSAYLHLTSDKIWSSIKEFAKRKYQFEVPDDARVGAKRVAVLRNLCQ
KVGITIAARKYDLEASTPFQPSDILNLQPVVKHSVPTCTDAKNLMEAGKIRMAEGTLNEA
YALFSEAFSLLQQITGPMHKDAANCCRYLALVLYHAGDTAGAIVQQHRELIINERCLGLD
HPDTAHSYGNMALFYHGLNQTELALHHMSRTLLLLSLASGPDHPDVAATQINVAMMYQDA
NNMNTALRYLQEALMKNERLLGPDHIQTAVCYHALAIAFSCMGAYKLSIQHEKKTYDILV
KQLGDDDSRTKDSENWLNTFKVREQQVNAQKQKGQANPSSTAIDFLKANPAFLQAMKAVV
TQSGDGSANVNRSLNAAVIGEGVPRVRGVDERAARATAEARKKAAARGLNVRNGPATSNA
SELHQILNLINSAASASATSATADAQKPASEGQAVNNGPAPNVTTREAKDADTNGPSAKS
GGNAPVGLGTSLESKKQKSKQKS
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaagtccaagggtgggaggaacaaggggaaggcgcagggcgcgagccaggcc
gtctcggcggagccagaggttcccgtgactgatgagcccgaagtggtgaatcccgagaat
ggggtagttagtgaaccccctgccgcggatggtggtgctgccgatgttgagaaagggaac
ggggatgtagctgtggctgcgcagtctgcaaaaaagccagttgaaggagagcttcattta
taccctgttcctgttaagacacagtcaggtgaaaagctcgagctgcagctaagcccagaa
gactctgtcattgatgtcaaacaatttctcttggatgctcctgaaacttgcttctataca
tgctacaatttgatattgcataccaaagatggctcaattcatcagttagaggactacaat
gaaatatctgagattgcagatataacttctggtggctgttcattggagatggttgctgga
atatacgatgagaggtctattaggttacatctccgacgtgtcagggaactactatctctc
tctactcttcatgtttcgttatccacatccctagctctgcagcaggactctgctcagggc
aaatctgcagatggtgggaaaactgctattcatgagcttgatggtttaaattttttggag
gacactactggcgctctcacttatttgttggcatctgcaccagcagagataaaatgcgta
gacagcataacttcttcttctttcaatcctccgccaagttatcggaggttgcatggagac
ctcatttatattgatgttgtgacattagaaggaaacgaatactgcattacaggaagctcc
aaatctttttatgtgaactgtagcagtggaagtattttggatccaagaccttcaaaacag
gttctggaggccagcactcttgttggtctactacaaaagatcagtgccaagtttaagaaa
ggtttccgtgaagttttggatcatagagcatcagcccatccgtttgagaatgttcagtcc
ttgcttcctgtgacttcttggttaggagcttatcctgtgccagaacataaaagggatgct
gccagggctgaagattctgttgtcttgtcatatggcactgaattgattggcatgcagaga
gactggaatgaggaattacagtcctgccgggagtttcctcatggcaatcctcaagaaagg
atactgcgtggcagagctctctacaaagtgacatgtgattttgttgatgctgctgtaaaa
ggggcagtcggtgtcattaatagatgcatacctccaattaacccaaccgatccagaatgt
tttcatatgtatgttcacaacaatattttctttagttttgctgttgactccgactatgaa
cacatttcaaaggaccacaagccagactgtcaaaatgggtccagcagaagcattaaagct
tgctccacagatgtgggggctaagccagataagaaccatgttgattccaatgctgtagct
aactcaaaacctgaagaacttcacggtgtctcggacaatagttcagatgcatctgcagag
gcacaattagcagatagtgagcaggcaacctatgcttctgcaaacaatgacttgaaagga
actaaggcttatcaagaagctgatatttctgggctttacaatcttgccatggcaataatt
gattacagaggtcacagggttgtagctcagagcatcatacctggtattcttcaaggagac
aagtctgattcccttctctatggttctgttgataatggcaagaagatatcttggaatgaa
tcgttccattcaaaggtggtcgaggctgcaaagcgactccatctgaaggagcatgtggtt
ttggatggttctgccaatcctgtaaaattagctgctacagttgaatgcaagggcattgtt
ggaagtgatgacaggcattacattttggatttgatgagagtgactcctcgagattctaat
tacattggacaggagaaccgcttttgtgtgttgaggcccgaacttgtagcctcattcgtt
gaggctgaatctacaaagcaattccctaagcagaaagttccagatactccagaagaatct
aatgtccaagttgcaagtacttctgatgctacggctacctctgtagaagaagatgacaag
tctgaggaaagctccgctcctagagctgctgaaaatgacgactcaagtgctgagatcctt
ttcaacccaaatgtatttacagagtacaagcttgctggtagtccagaggaaattgctgca
gacgaagagttggtaaaaaaggctggtacatatcttctagacatagtgatcccaaaattt
gttcaggatctttgctcccttaatgtctcccctacggacggacaaactttaactgatgta
ctgcatctccatgggataaatgttaggtatctgggcaaaattgcaggcatgatcaaacat
ttaccgcatttatgggacttgttttctgctgagataatagtcaggtctgcaaagcatgtt
atcaaggaaatactgaggcaaagcccagatcatgatattggaccagctattgctcatttc
ttaaactgttttgttggcaaagttttggttgcttccacaaagggtagtcttggcagcaca
cagttaaaaactcagaagggtcaggaaaatagtcagactcataaatctacaaaaggccag
aaattaagtcacggtgctgcttctgcttcaggaaagggcttatcagcatatttgcatcta
acctctgataaaatttggtctagcattaaggaattcgcaaaacgtaaatatcagtttgaa
gtgccagatgatgctagggttggggctaaaagggttgcggtgcttcgcaatctttgccaa
aaggtaggaataacaatcgctgctcgcaaatatgatcttgaagcttcaactccattccaa
ccttcagatatattgaatctccaaccagttgtcaagcattcggttcctacctgtacagat
gcaaagaaccttatggaagcagggaaaatcaggatggctgagggaacactgaatgaggcc
tatgcactgttttctgaagctttttcactgcttcagcagataactggtcccatgcacaag
gatgctgcaaattgttgccggtaccttgctttggttctctaccatgctggtgatacagct
ggggcaattgtgcagcaacatagagaacttatcataaacgagcgatgccttggtctagat
caccctgacacagcccacagttatggtaacatggctttgttctatcatgggctcaatcaa
actgaactcgcactgcaccacatgtcccgcacactgcttttgctaagtttggcatcaggt
cctgatcacccagatgttgcagcaactcaaataaatgttgcaatgatgtaccaggatgcc
aacaatatgaatactgctcttaggtatcttcaagaagcgcttatgaagaatgagcggctt
ctcggtccagatcatattcaaacagctgtatgctatcatgctcttgccattgcattcagt
tgtatgggcgcatacaagctttcaattcagcatgaaaagaagacatacgatatactggta
aagcaattaggggatgatgactcgcggactaaggactcagaaaattggttgaatacattt
aaggttcgagaacagcaggttaatgcccagaagcaaaaaggccaggcaaatccatcctca
actgctattgatttcttgaaggcaaatcctgcatttttacaagcaatgaaagctgttgtg
acccaatcaggtgatggatcggcgaatgtcaacagatcactcaatgctgcagtaattgga
gaaggtgttccccgagtaagaggagttgatgagcgagctgctcgagcaactgcagaagct
cggaagaaagctgctgcaagaggccttaacgtgcgtaatggacctgctacaagtaatgcg
tctgagctacatcagattctcaatctgatcaactcagctgcttcagcgtctgctacctct
gcaactgcagacgcacagaagccggcatccgagggacaggcggtgaacaatggacctgct
ccaaacgtcactacaagggaagcgaaggatgcagatactaacgggccatccgcgaagtcc
ggcggtaatgcgccagtaggattagggacgtcactggagtcgaagaagcagaagtcaaag
cagaaatcatag
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integrated database retrieval system
