Phragmites australis (common reed): 133919720
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Entry
133919720 CDS
T10575
Name
(RefSeq) homeobox-leucine zipper protein HOX16-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133919720
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
133919720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
HALZ
Homeobox_KN
OVT1
DUF2913
CCDC138_cc
Motif
Other DBs
NCBI-GeneID:
133919720
NCBI-ProteinID:
XP_062220192
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All DBs
Position
5:41172943..41175024
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AA seq
324 aa
AA seq
DB search
MESGRLIFNTTGSGAGQMLFLDCGAGIPGGGMFHRGGRPVLGLEEGRGVKRPFFTSPDDL
LEEEYYDEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQN
RRARWKTKQLERDFECLKASFDALRAEHDAILQDNHCLRSQVLSLTEKLQEKEAAEGAAV
NATELLADAKASLAADADEQPAADAALEAQQVKSEDRLSTGSGGSSVVDADALLRAGGRL
AAAVDSSVESYFPGGDDQFHDCAMGPLDHGAREFQSEEDDGAGSDEGCSYYADDPAAAAA
LFASHAHHHADDDDGQISWWMWND
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgggccggctcatcttcaacacgacgggctccggcgcggggcagatgctcttc
ctggactgcggcgcgggcatccctggcggcggcatgttccatcgaggcgggagaccggtg
ctcggcctggaagaagggcgcggcgtaaagcggcccttcttcacctcccccgacgacctt
ctcgaggaggagtactacgacgagcagctgccggagaagaagcgccgcctcaccccagag
caggtgcatctgctggagaggagcttcgaggaggagaacaaactggagccggagcgcaag
acggagctggcgcgcaagctggggctgcagccgcgccaggtggccgtctggttccagaac
cgccgcgcccggtggaagaccaagcagctcgagcgcgacttcgagtgcctcaaggcttcc
ttcgacgccctccgcgccgagcacgacgccatcctccaggacaaccactgcctccgctcg
caggtgttgtcgttgaccgagaagctgcaagagaaggaggcggcggagggcgccgccgtc
aacgccacggagttgctggcagacgcgaaggcatctctggccgccgacgccgatgagcag
ccggcggcggacgcggcgttagaggctcagcaggtgaagtccgaggacaggctgagcacg
ggcagcggcgggagctcagtggttgacgcggacgcgctgctccgcgccggcggccgtctc
gctgccgccgtggacagcagcgtggagtcctacttccccggcggcgacgaccagttccac
gactgcgcgatgggtcccttggaccacggcgcaagggaattccagtcggaggaggacgac
ggcgcgggcagcgacgagggctgcagctactacgccgacgaccccgccgctgccgccgcc
ctcttcgccagccacgcccaccaccacgcggacgacgacgacggacagatcagctggtgg
atgtggaacgactag
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