Phragmites australis (common reed): 133919956
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Entry
133919956 CDS
T10575
Name
(RefSeq) glutamate receptor 2.8-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
paua04040
]
133919956
Ion channels [BR:
paua04040
]
Ligand-gated channels
Glutamate (ionotropic)
133919956
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Peripla_BP_5
DUF6170
Rv0078B
Motif
Other DBs
NCBI-GeneID:
133919956
NCBI-ProteinID:
XP_062220525
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Position
5:44864889..44871026
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AA seq
983 aa
AA seq
DB search
MQWYMGRRPVHSSSSSASFVIRLVLVVLAVWCQVILQVAPAQVRVGVVLNMASPVGPRGR
VGIEMAVEDYYAARPSSKTRIALRFRDSGGDVLGAASAAVDLIKNEQVQAIIGPPTSAEA
EFVAYIGNRTHVPILSYSATSPALSPAQTPFFVRTAANDSFQAAPVAAVLAAFGWHAAVV
AYEDSPYGSGILPALADALQGVCARIMDRTAVPADADDDRLDAVLYRFMAMPTRVFVVHM
NPSLAARFFRRARNAGMMSVDYAWIATDGVGSAVDAMSPEDVDEMQGVVSLRPYVQVTDH
VKNFSARFRARLRRENPSADDYVHDQTVVMLWAYDTAWAIAAAAEAASVSSPAFQTPQLS
TALTDLDRLGVSATGATLLNAVHDTTFHGLAGNFTLVDGQLLPPAYEIVNIFGKGARTVG
FWTPESGVMQALNANGAKGLTQIIWPGNSHLWPKGWVVSPNGQQLRVAVPVKKGFTQFVE
VTKDSTTGRRNVTGYCIEVFDAVMRNMPYPVSYQYVPDEDSAVSYEKFVSQVPEQLADVV
VGDVTITASRMAEVDFTMPFTESGWSMVVAVRTDTGTSMWIFLQPLTTSLWIASFAFFCF
TGFVVWVIEHRINPEFRGTPWQQFGLIFYFAFSTLVFSHKEKLESNLSRFLVIIWVFVVL
ILTSSYTASLTSMLTVQKLQPTVTDVRELQRRGDYIGYQEGTFIEGSLQKLGFDKAKMRS
YSTAKQYADALSKGSANGGVAAIFDEIPYLKLFLSQYCDGYTMVGPVYKTDGFGFVFPRG
SPMTPDVSRAVLALAEGDEMAQIEKKWFGEPGACPSQSGCATVGSSNLNFRSFGGLFLIT
GVVSGLMLLIYLVTFVYQERDELRAAEEAGSGSSSMGRLRAWLRHYDQKDTRSRTFKTRN
DESIRNGNQTQRWIDETVRDGGDANGRVQAASEEEAIGMSPFSISTGTEMIAGSSPASEL
GTSFEQRMQEAANSMEMPRTTAS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggtacatggggaggcgcccggtgcactcttcttcctcctctgcctcgttcgtc
atccgtctcgtcttggttgttctggcggtttggtgccaggtgatcctgcaggtggccccg
gcgcaggtgcgcgtcggcgtcgtccttaacatggcgtcgccggtcgggccgcgggggcgg
gtcggcattgagatggcggtggaggactactacgccgcgcgccccagttccaagaccaga
atcgcgctgcgcttccgggactcgggcggagacgttcttggcgccgcttccgccgcggtg
gacctgatcaagaacgagcaggtgcaggccatcatcgggccgccgacgtcggcggaggcc
gagttcgtggcttacatcggcaaccgcacccatgtccccatcctctcctactccgccacg
tccccggcgctgtccccggcgcagacgcccttcttcgtgcgcaccgcggccaacgactcc
ttccaggccgcgcccgtcgccgcggtcctcgccgctttcgggtggcacgcggcggtggtc
gcgtacgaggactcgccctatggttccggcatcctcccggcgctcgccgatgcgctccag
ggcgtctgcgcgaggatcatggaccgcacggctgtgccggcagatgcagacgacgaccga
ctcgacgcggtgctctaccgcttcatggcgatgcccacgcgcgtgttcgtcgtgcacatg
aacccttccctcgctgcgaggttcttccgccgcgctaggaacgccggcatgatgtcggtg
gactacgcctggatcgccacggacggcgtcggcagcgccgtcgacgcgatgagccctgaa
gacgttgacgagatgcagggggttgtcagcctccggccgtacgtgcaggtgacggaccac
gtcaagaacttctcggcgcggttcagggcgaggctccggcgggagaacccgagcgccgac
gactacgtccatgatcagaccgtggtgatgctctgggcgtacgacacggcatgggcgatc
gcggcggctgctgaggcggccagtgtctccagcccggcgttccagacgccgcagctgagc
acggcactgacggacctggaccggctcggcgtgtcagccaccggagcaacacttctcaat
gctgtgcacgacacgaccttccacggcctcgccggtaacttcacgctcgtcgacgggcag
ctgctgccgccggcctacgagatcgtcaacatcttcgggaaaggcgcgaggacagtgggg
ttctggacgccggagtccggagtgatgcaagctcttaacgccaacggcgccaaagggctg
acgcaaattatttggccaggtaattcacatttgtggcccaaaggctgggtcgtgtcgccg
aacgggcagcagcttcgcgtcgccgtgccggtgaagaaagggttcacacaattcgtggag
gtcaccaaggactcgacaacaggaaggcgaaacgtgacaggctactgcatcgaggtgttc
gacgcggtcatgcgcaatatgccatatccggtgagctaccaatacgtgccggacgaagac
agcgccgtgtcctacgaaaaattcgtgtcccaggtgcccgaacagctagcggacgtcgtc
gtcggcgacgtgacgatcacggcgagtaggatggccgaggtggacttcaccatgccgttc
accgagtcggggtggtcaatggtcgtggcggtgcgcacggacacgggcacgagcatgtgg
atcttcctgcagccgctcaccaccagcctctggatcgccagcttcgccttcttctgcttc
accggcttcgtcgtgtgggtgatcgaacaccgcatcaatcccgagttccgcggcacgccg
tggcagcagttcggcctcatcttctactttgccttctccacgctcgtcttctcgcacaag
gagaagctggagagcaacctgtcgaggttcctggtgatcatatgggtgttcgtcgtcctc
atcctgacgtcgagctacacagcgagcctgacgtcgatgcttaccgtccagaagctccag
ccgacggtgacggacgtgagggagctccagcggcgcggcgactacatcgggtaccaggaa
ggcaccttcatcgagggctcgctccaaaagctgggcttcgacaaggcaaagatgaggagc
tacagcacggcgaagcagtacgccgacgcgctgtccaaggggtcggccaacggcggcgtc
gccgccattttcgacgagatcccgtacctgaagctcttcctgtcgcagtactgcgacggc
tacaccatggtcggcccggtctacaagaccgacggcttcgggttcgtgttcccgaggggc
agcccgatgacgccggacgtgtcgcgcgcggtcctggccctggcggaaggggatgagatg
gcgcagatagagaagaagtggttcggcgagcccggcgcgtgcccgagccagagcggctgc
gccaccgtcggctcgtcgaacctcaacttccggagcttcggcggactgttcctcatcacc
ggcgtggtgtccggtctcatgctcctcatctacctcgtcaccttcgtctaccaggagcgc
gacgagctccgggcggcggaggaggccggctccgggagctcgtcgatggggaggctgcgc
gcgtggctgcggcactacgatcagaaggacacgaggtcccgcaccttcaaaacgcgcaac
gacgaatccatcaggaacgggaaccagacgcagagatggatcgatgagaccgtaagggat
ggcggcgacgcgaacggccgggtgcaggctgcgagcgaggaggaagctatcggcatgagc
ccgttcagcatctccaccggcacggagatgatcgccggatcgtcgccagcgtcggagctc
gggacctcgttcgagcagaggatgcaggaggcggcaaactccatggagatgccaagaacg
acggcctcgtaa
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