Phragmites australis (common reed): 133919988
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Entry
133919988 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133919988
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133919988
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133919988
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133919988
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133919988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
133919988
NCBI-ProteinID:
XP_062220579
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All DBs
Position
5:45277635..45287019
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AA seq
987 aa
AA seq
DB search
MGEAAAKGLMHRRIEFHAATKPRAAAAVAVPGGFRMERLLADADKRVAARSEGEGRTFEK
GESSGGSGFDPELSAARIYLRRIGAGLHNLGNTCYLNSVLQCLTYTEPFVAYLQSGKHKS
SCRTAGFCALCALQNHVKCALQSTGKILTPMLFVKNLRCISRSFRNSRQEDAHELMVNLL
ESMHKCCLPSGIPSESPSAYEKSLVHRIFGGCLRSQVRCTRCSHCSNKFDPFLDISLEIG
NAATLMKALQNFTKEELLDDGEKHYNCQHCKQKVVAKKRFTIDKAPSVLTIHLKRFNPFN
PLKKIDKMVDFQTTLNLKPFVSNSEGMDLKYSLYGVLVHAGWNTQSGHYYCFVRTSIGIW
HNLDDNQVRQVHEVDVLRQKAYMLFYVRDRVRSSMIHKDNGAARLSEKKMISEKIACLNG
AIRNGLAETALNVSSITNGDTKLQKQNPDNGLPSSICVVSQEQCSSEHSNTEPIKASTSQ
NNEPASVQKVLCTHPDSAATLSTKTEQIIPDSQRETTSPGQPDVCIYDASCDQKACEKPL
QELQLEPDGALTDSGKDIPAAAFPICNGADGLLGANEQVNEPRTDPFCKPTPDIDTTTIA
EVIPTEDTAVSNGTISSNEDLTSDNEAKETEPVKQHDGLVVVKELSAKNIDDKVNAEEQA
SVLNNTLEDGKALVKELSVMDTDHMAEAEEQTSVLNNSLDIGLVDSEKKICSEGSAHVVC
SEDCAQAICSEDSVQVLDKGPCDGSLHRKMEIKSKKHVKYPVVNLFFGSKRLLFTSLKPH
KKRKHKKTKRRSGSSMDIESIANDQQTSTSETVLTGGCKSHRWKRSRNTASSEDGVQIFN
KKQNLGDSSASELTMDKKDSKDETLASAELASSCPSSVANPGSGKCAYTNEKGSWHFNLL
TRGLREITVPRWDDNGMPNTMATELQYPSSTSIGYVLDEPDEYDRGRRKKVKKWIEDFSG
PKPFQETANIRSRKADQARSGNQPLRI
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggcggcggcgaagggcctgatgcaccggaggatagagttccacgccgccacg
aagccccgtgcggcggcggctgtggctgtgccgggagggtttcggatggagaggctcctc
gcggacgctgataagcgcgtggcggcgcggagtgagggcgagggcaggacgttcgagaag
ggggagagtagcggcgggagtgggttcgatccggagctcagcgctgcgaggatctacctg
cggagaattggggctggcttgcacaaccttggtaacacgtgctacctcaattcggttctg
caatgcttgacatataccgagccattcgtggcctacctgcagagcggcaagcacaagtct
tcatgtcggactgctggattctgtgcattatgcgctcttcagaaccatgttaagtgtgct
ctacagtcaactgggaagattttgacaccgatgctgtttgtcaagaacttaagatgcatt
tctcgtagttttcggaattctaggcaggaagatgcacatgagctaatggttaacttgctt
gagtcaatgcacaaatgctgtttgccttctggtataccaagtgagtctccaagcgcttat
gagaagagtctagttcacagaatatttggtggctgcttaagaagtcaggtgagatgtaca
aggtgctcacactgttccaacaaatttgatcctttccttgatatcagtcttgaaattggc
aatgctgccacattgatgaaagcacttcaaaattttaccaaggaggagctattagatgat
ggggaaaagcactacaactgtcagcactgcaagcagaaagttgtggccaagaaaaggttt
actatcgataaggctccttctgtgctgactattcatctgaagcgctttaatcctttcaac
cctcttaaaaagattgacaaaatggtggattttcaaacaacattaaacttgaagccattt
gtcagcaattcagaaggtatggacttgaaatatagcctttatggtgttttggttcatgct
ggttggaatacacaatctggtcattattattgctttgttcggacatccattgggatatgg
cacaatcttgatgataaccaggttcgccaagtccatgaggtagatgtactgaggcagaaa
gcatacatgttattttatgtgcgtgacagagtaaggagttcgatgattcataaagataat
ggtgccgccagattgtcagaaaagaaaatgatatctgagaagatcgcatgtttgaatggc
gcgattcgaaatggtttggcagaaacagcattgaatgtttcctcaattaccaatggagat
acgaagttgcagaagcagaacccagataatggcctgcccagcagtatttgcgttgtttca
caagaacagtgttcaagtgagcatagcaacactgaacctattaaagcttcaacatcccaa
aacaatgagccagcttcagtacagaaagtcctatgcacacatccagatagtgctgctacc
ttgtccaccaaaacagagcaaataattcctgatagtcaaagggagacaacgtctccagga
cagcctgatgtttgtatttatgatgcaagctgcgatcagaaggcatgtgagaaaccattg
caggaactacaactagaacctgatggtgcactcactgattcaggcaaagacatccctgct
gctgcttttccaatatgcaatggtgctgatgggttattgggggcaaatgagcaggtgaat
gaacctcgaacagatccattttgcaaaccaactcctgatattgatacaacaactattgcc
gaagtcatcccaactgaggatactgctgtttctaatggaacaatatccagcaatgaagat
ttaaccagtgacaatgaagctaaagagacagagcctgttaagcaacatgatgggctagtt
gtggtgaaggaactttctgcgaaaaacattgatgataaagtaaatgcagaggagcaggct
tctgtgctgaacaatacactggaggatggaaaggctttggtgaaggagctctctgtgatg
gacactgaccatatggctgaggctgaggagcagacctctgtgctgaataattcactggac
attggactggtcgactctgagaagaaaatctgttctgaaggctctgcacatgtggtttgc
tctgaagattgtgcacaagcgatttgctctgaagactctgtgcaggtgttagataaaggc
ccatgcgatggcagtttacatagaaaaatggaaatcaaatcaaagaagcatgtgaaatat
ccagttgtcaacttgttttttgggtccaaacgactgctgttcacttcacttaaaccgcac
aagaaaaggaaacacaagaaaactaaaaggcggtctggatcttctatggacattgaaagc
attgccaatgatcagcagacatcaacatcagaaactgttcttactgggggctgtaaatct
catagatggaagcgctcacgcaatactgcaagttctgaagatggtgtccagatttttaac
aagaaacaaaatcttggagactccagtgcttctgagcttaccatggacaagaaagacagc
aaggatgaaacacttgctagtgctgagctagcaagctcgtgcccaagctctgtggcaaat
cctggctcaggaaaatgtgcatatacaaatgagaaaggctcctggcattttaatctcctg
acgaggggtttaagagaaatcactgttccacgatgggatgataatggcatgccaaatacc
atggcaacagagctgcaatatccgagttccacgagcattggttatgttttagatgaaccg
gacgagtacgaccgtggaaggaggaagaaggtcaagaaatggatagaagacttcagtggg
ccgaaacctttccaagagacggcaaacatcagatcacggaaagctgaccaggccagatct
gggaatcagcctctcaggatatga
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