Phragmites australis (common reed): 133919996
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Entry
133919996 CDS
T10575
Name
(RefSeq) serine/threonine-protein kinase VPS15-like isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133919996
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
paua01001
]
133919996
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133919996
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133919996
Protein kinases [BR:
paua01001
]
Serine/threonine kinases: Other
VPS15 family
133919996
Membrane trafficking [BR:
paua04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133919996
Autophagy
Autophagosome formation proteins
PI3K complex
133919996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
Pkinase
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
PK_Tyr_Ser-Thr
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
HEAT
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
Kinase-like
WD40_Gbeta
IL2
Tti2
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Cohesin_HEAT
APH
DUF7691
TCAD9
Motif
Other DBs
NCBI-GeneID:
133919996
NCBI-ProteinID:
XP_062220589
LinkDB
All DBs
Position
5:complement(45363544..45372296)
Genome browser
AA seq
1477 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRGRFLKSVRCKHDEGLLLVKVYFKRA
GEPIDLKEHERRLERIRNAFKGIEGSHVWPFQVWLQTDKAAYLLRQYFFNNLHDRLSTRP
FLSQIAKKWLAFQLIHAVEQSHSKGVCHGDIKCENVLVTSWSWLYLADFASFKPTYIPDD
DPSDFSFYFDTGGRRRCYLAPERFYEHGGESQVAADAPLQPSMDIFSLGCVLAELFLGGQ
PLFELSQLLAYRRGQYDPKHTLEKIQDTGIREMILHMIQLDPKERLSCRSYLQKYESVVF
PIYFSKFLHKFFSDIVLLGSDARVEKIQENFEKMREIMMGSSKTEQIKKSALCEHSEPYG
KQGIRWQMLNSPGDSTKTTTVKKNTPVDHQQIVGDLNFLLKEVEHRSNHTSTKVMKDMEH
FVASSTSSASGIQSLQLVNQEGKQTGNCLMVQKNVVFHVQKISKSNLRSLLAGYDGQSDT
YSFDIFQQIDSKVSCEGMVLLASLLCSCIRSVKKPELRRASLILLRFSSSYIDDDSRLQL
VVPYVIAMLSDPAAIVRCAALETLCDVLCLVQDFPISDTVIFPEYILPMLSLLPDDTEES
VRVCYASNIHKLALTAYRFLLRSRSIAEIGPLDESVVPLRPQSAESTAKKQDKIDGRLAD
LRKSIYEIVQELVMGPKQTPNVRRALLQDIGYLCYFFGHKQSNDFLLPILPAFLNDHDEQ
LRAVFFGQIVFVCYFIGSRSVEEYLLPYLEQALSNDMEAVLVNALDCLTMMCKSGYLRKR
VIVGLFGKAFPLLCYPINWVKRFAVRLVAACSENLGSVDTYVYLCPHLRHFLHREPPSLS
SETALLSCLKPPVSKSVLYQALDAQDTGDILLKSGGKKELTVHGGRYPSTAQSGSSTILE
DAARLRGPNISSNMSLDVKDSVSSDKSLYSGFALHASPGNSSFYDGLSKGIPSYSVCTDK
RGLGETHMVPDSSVYKASIRLPWLEPNHPGVQTRDDHFSSKQQDLSINDSTKRSSSLRGD
SISNSDIAEPSFTRSLTRSAVNMETGWRPRGVLVAHLQEHRFSVNDIAVSNDNTFFVTAS
DDSSIKIWDTRRLEKDIAFRSRLTYSMGTSRALCTTMLHGTSQVVVGASDGTLHLFSVDC
ARGVGSAVERYSGIVDVKRKDIKEDAILSVINCSSDSFSPTVLFSTEHCGIHKWDTRINS
ESWSFKSSPEEGYISALVVGPCGNWFISGSSRGVLTLWDNRFLLPVNSWQYSTVSPIEKL
CLLILPPNSISSAGRPLVFVAAGCNEVSLWNAENGSCHQMFRTASTENEAVMPKAPSRPL
NKSITKDVRRAGNYKYRIEELNDPPVRRPGIRSLLPLPCGDLLTGGTDLNIRYWDQARPE
QSFCIAGPSVKEVPAKGVEKDEYYCYDIRSSFGVQVVQEICKQHTTDSKLMHKTQLAMAA
ADSAGCHRDAILALASFNLSGQRLISASRDGAVKVWK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcggaccactcaggcatcggcgacggagtactacctccacgat
ctcccgtccacgtacaacctcgtgctcctcgatgtcgtcagccgcggccgcttcctcaag
tccgtccgctgcaagcacgacgagggactactcctcgttaaggtctacttcaagcgcgct
ggagagcccatcgacctcaaggagcatgagcggaggctggagcggatcaggaacgcgttc
aaggggatcgagggatcccacgtatggcccttccaggtttggttacaaacagataaggcg
gcgtatctcctgaggcagtacttcttcaacaacctgcatgatcgattaagtacacgccct
ttcctcagtcaaattgcgaagaaatggcttgcttttcagttaatccatgctgtggagcag
agccatagtaagggagtttgccatggtgacataaaatgtgagaatgtactcgttacttct
tggagttggctatatcttgcggacttcgcatctttcaaaccaacttacatcccagatgat
gatccttctgatttttcattttactttgacactggaggaaggcgaagatgctatctagcc
ccagaaagattttacgaacatggtggtgagtcccaagttgcagcagatgcacctctgcaa
ccatctatggatatattttctctagggtgtgttctcgctgaacttttcctaggaggtcag
ccactttttgagctttcgcaacttctggcgtatcggcgtggtcagtatgaccccaaacat
accctagaaaagatacaagatactggtattcgcgaaatgatacttcacatgatccaattg
gacccaaaagaaaggctatcatgtagaagctatctgcaaaaatatgaatctgttgtattc
ccaatttatttttcaaaatttctgcacaagttcttctcggatattgttctacttggctca
gatgccagggttgagaagattcaagaaaattttgaaaagatgcgtgaaataatgatgggc
agctcaaaaactgaacaaatcaagaagtctgctttgtgtgagcatagtgaaccatatggg
aaacaaggcatcagatggcaaatgttaaactcaccaggagattctacgaaaactacaaca
gttaagaaaaatactcctgtagaccatcaacagattgttggagatctcaatttcctcctc
aaagaagtggagcacaggagcaaccacacaagcacaaaggtcatgaaagacatggaacat
tttgttgcatcaagcacttccagtgcaagtggtattcagtccttgcagctggttaatcaa
gaaggaaaacaaactggaaattgtttaatggtccagaaaaatgttgtattccatgtgcag
aagatatcaaagagtaatttacgctccttattggctggttatgatggccaatcggatacc
tatagctttgacatttttcaacagatagactccaaggtgagctgtgagggcatggtcttg
ctggcctcgttactctgctcatgcatacgcagtgtgaaaaaacctgagctaagaagggcc
agtctcattcttctgaggttttcttcctcatatatagatgatgatagtcgcttgcagcta
gtggttccctatgtgattgcgatgctttcagatccagctgccattgtccgctgcgctgct
ttggaaaccttatgtgatgttctttgtcttgttcaagactttcctatcagtgatacagtg
atattcccagagtacatcctcccaatgctctctttgctccctgatgatacggaggagagt
gttagagtttgctatgccagcaacattcataagctggctttaacagcttatagattccta
cttcgttctcgtagcatagctgaaattgggcctctggatgaatcagtggtacctctcaga
ccacagtctgcagaatcaacagcgaagaagcaagataaaattgatggccgacttgcagat
ctgagaaaatctatttatgaaattgtgcaagagttggtaatgggaccaaagcaaacacct
aatgtccgtagagctcttctgcaagacataggttatttgtgttacttctttgggcacaaa
caaagcaatgattttcttctccctatacttccagcatttctaaatgaccatgatgagcag
ctccgtgcagttttctttggtcagattgtctttgtttgctattttattggttcaagaagt
gttgaggaatatcttttgccatatcttgaacaggcactaagtaatgatatggaggctgtt
cttgtaaatgcacttgattgcttgaccatgatgtgcaaaagtggttatttgaggaaaaga
gtaattgttggtctatttggaaaggcttttcccttgctgtgctatccaatcaattgggtt
aaacggtttgctgtaagacttgttgctgcctgtagtgagaacttagggtctgtagatact
tatgtgtatctttgtccacatctaaggcatttcctacacagagagccaccttcattatcc
tctgaaactgctcttctttcatgtcttaaacctccagtctcaaaatcagtcttataccaa
gctttagatgctcaggacacaggagacattttactgaagagtggtggcaaaaaagaactg
acagtacatggtggaagatacccttctacagcacaaagtggatcctcaaccattcttgaa
gatgctgcaagattgagaggcccaaatatttccagcaacatgtctttggacgtcaaagat
tcagtttcttctgataaatcattatattctggctttgcactacatgcatctcctgggaat
agttccttttatgatggcttgtctaaaggaataccatcatattctgtttgtactgataag
cggggtttaggagaaacacacatggtccctgattcatcggtttataaagcttcaataagg
ctaccttggttggaacccaaccatccgggtgtgcagactagagatgaccattttagtagc
aagcagcaagatttaagcatcaatgactctacaaagagaagttcctctttgcgaggggat
agcatttcaaactctgatattgcagagccgtccttcactagatcactcactagatcagca
gtgaacatggagactggatggaggcctcgtggggttctagtggcacatctgcaggaacat
cgcttttctgtcaatgatattgccgtatctaatgacaataccttttttgtgactgcttcg
gatgactcaagtatcaagatatgggatacaagaaggttggaaaaggacattgccttcaga
tcaaggttaacgtatagcatgggtactagtcgagctctatgtacaacaatgcttcatggt
acatcacaggttgttgttggtgccagtgatggaacattacacttgttttctgttgattgt
gcacgtggcgttgggagtgctgtggaaagatattctggcattgttgatgtaaaaaggaaa
gatataaaagaagacgcaattctcagtgtcataaattgttcatctgacagctttagccca
actgtgcttttcagcactgaacattgtggcatccataaatgggatacaaggatcaactca
gaatcttggtcatttaaatcctcaccggaggagggatatatatcggcacttgtagtgggg
ccgtgtggaaattggttcatctcaggttcctcaagaggtgttcttacgttgtgggataat
aggtttttgctgcctgttaattcatggcaatattccacagtaagtcctatagagaaattg
tgcttgcttatactaccaccaaattcaatatcttctgctggaaggccattggtttttgtc
gctgctggctgcaatgaagtttccctatggaatgctgagaatggaagctgccaccagatg
tttagaacggcaagcacagaaaatgaagctgtgatgccaaaggcaccatcaagacctctt
aacaaatcaatcaccaaagatgtgagacgagcaggaaattataagtacagaattgaggaa
ttgaacgacccacctgtacgccgtccgggcatccgctcattgcttcccttaccatgtggt
gacctcttgaccggaggaacagacttgaatattcgttactgggaccaggccagacctgag
caaagcttctgtattgctggcccctcggtgaaagaagttccagcaaaaggagttgaaaag
gacgagtattactgttatgatataagatccagttttggagtacaggttgtgcaggaaata
tgcaaacagcataccacggactccaagttgatgcacaaaactcagctcgcgatggctgcc
gcagattccgccgggtgccaccgtgatgcaatacttgcgttggcatccttcaatttgtcg
gggcaaaggttgatatcagccagtagagacggtgctgtcaaagtgtggaaatag
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integrated database retrieval system
