Phragmites australis (common reed): 133920002
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Entry
133920002 CDS
T10575
Name
(RefSeq) DNA replication licensing factor MCM5
KO
K02209
DNA replication licensing factor MCM5 [EC:
5.6.2.3
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133920002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133920002
03036 Chromosome and associated proteins [BR:
paua03036
]
133920002
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133920002
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
133920002
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
133920002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
MCM5_C
MCM_N
AAA_3
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
133920002
NCBI-ProteinID:
XP_062220596
LinkDB
All DBs
Position
5:complement(45433936..45438582)
Genome browser
AA seq
729 aa
AA seq
DB search
MSGWDEGAVFYSDQAQFPRGGPGGDPTADLTRHSALRKFKEFLRGFTGPTGDFPYRESLV
HNHDHVTVAIEDLDAFDAELSDKIRKSPADYLPLFETAAAEVLSSLRSKVAGETGEMEEP
VTGDVQILLFSKENCLSMRSIGADHMSKLVKIAGIAIAASRVKAKATHVTLICKNCRSVR
TVSCRPGLGGAIVPRSCDHVPQPGEEPCPLDPWIAVPDKSKYVDLQTIKLQENPEDVPTG
ELPRNVLLSLDRHFVQTIVPGTRLTVVGIYSVFQASANQKSAFGVKQPYIRVVGLEQSRD
NNSNGPSNFTLDEEMEFKEFAQRPDAYAKICSMIGPSIFGHSDVKKAIACLLFGGSKKRL
PDGVRLRGDIHVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVTRDSSSR
EFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVL
AAANPVSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYDQDKRIASHIIKVHASGA
AASSKNTDASEGENWLKRYIEYCRVTCKPRLSEKAAEMLQNKYVEIRQKMRQQAHETGRA
AAIPITVRQLEAIIRLSESLAKMRLTSVATPEHVEEAFRLFNVSTVDAARSGINEHLNLS
PEIANEIKQAEAQIKRRMGIGSHISERRLIDELTRMGMNESIVRRALLIMHQRDEVEYKR
ERHVIVRKA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttgggacgagggagccgtgttctacagcgaccaggcgcagttcccacgcggc
ggccctggtggcgaccccaccgccgacctcacccgccactccgccctccgcaagttcaag
gagttcctccgcggcttcaccggccccaccggcgacttcccctaccgtgagagcctagtg
cacaaccacgaccatgtcaccgtcgccatcgaggacctcgacgctttcgacgccgagctc
tctgacaagatccggaagtcgcccgcagattatctgccgttgtttgagacggctgcagct
gaggttctctcgagcctccggtcgaaggtcgccggcgagaccggggagatggaggagccc
gtcaccggggatgtgcagatcctcctgttctccaaggagaactgcctgtccatgagatct
attggggcggatcacatgtcgaagctggtgaagatcgcgggaattgcaattgctgcatcg
agagtgaaagccaaggccactcatgtgactcttatctgcaagaactgccgcagtgtgagg
acagtgtcgtgcaggccaggcctcggtggggctattgtccctcgatcatgcgaccatgtt
ccgcagcctggagaagagccttgccccctggacccctggatcgcagtcccagataagagc
aagtatgtggatcttcaaaccatcaaattgcaggaaaatccagaggatgttccaactggt
gaacttcctaggaatgtgctgctttctctagataggcactttgttcagaccatagttcct
gggacgaggttaactgtagttggtatctacagcgtcttccaagcatctgccaaccagaag
agtgcttttggagttaaacaaccttacattagagttgtgggattggagcaatctcgagac
aataactcgaatggcccctcaaatttcacactcgatgaggaaatggaattcaaagaattt
gcgcagaggccagatgcatatgccaagatttgctcaatgattggcccttcaatctttggc
cattctgatgtcaagaaagctattgcatgtttgctgtttgggggatcgaaaaagaggcta
cctgatggtgtgcgtttgagaggagacattcatgtcttgcttttgggtgatccatccaca
gcaaaatcccagttcctcaagtttgtagagaagacagcaccaattgcagtttatacttct
ggaaaaggttcatctgcagctggtcttacggcatctgttacccgggatagtagctcgcgt
gagttttatttggaaggaggggccatggttttggctgatggtggagtggtttgtatcgat
gaatttgataaaatgagacctgaagacagagttgcaattcatgaagccatggagcagcag
acgatatctattgccaaagctggcattacaacagtactcaattcaaggacatcagttctt
gcagctgccaatccagtttcagggcgctatgatgatcttaagactgcacaagataacatt
gatctgcagaccaccatcctttctagatttgatctaatctttatcgttaaagatatcaga
atgtatgatcaagataagcgaatagcaagtcacatcatcaaggtgcatgccagtggtgct
gctgcttcatctaagaacacagatgctagtgaaggagagaattggctgaaaaggtacatt
gagtactgccgtgttacatgcaaaccacggctttcagaaaaagcagctgagatgctgcag
aacaaatatgttgaaattagacagaaaatgagacagcaagctcatgagacagggagggct
gcagcgatacccatcactgtgaggcagcttgaagccatcatacgtttgagtgaatctctt
gcaaagatgagattgacaagtgtggctacaccagagcatgttgaagaggcatttagactg
tttaatgtctccactgttgatgctgcaagatctggaatcaacgagcatttgaacttgtca
ccagagattgcaaacgaaatcaagcaagcggaagcacaaataaagagaagaatgggcatt
ggaagccacatatccgagcgacggctgatcgatgaactaactaggatgggaatgaatgaa
tccattgttagaagagctcttctgatcatgcatcaaagggacgaggtggagtataagaga
gagcgccatgtgattgtccggaaggcttga
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