Phragmites australis (common reed): 133920170
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Entry
133920170 CDS
T10575
Name
(RefSeq) protein argonaute 1C-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133920170
03036 Chromosome and associated proteins [BR:
paua03036
]
133920170
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133920170
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133920170
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133920170
microRNA pathway
RISC loading complex
133920170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
133920170
NCBI-ProteinID:
XP_062220855
LinkDB
All DBs
Position
5:complement(47016975..47025336)
Genome browser
AA seq
1049 aa
AA seq
DB search
MGSRRPRQHPGSGEGSQAPEPGGRGGSGRGGRAHGAPYAQQVLQGGRGGNQGRSGGRQSR
VDEAQQQQQRGRPGEYPGRGQVRGGTRPQQYPRGGRGGHGAGLPSTESSSPLAPELRQAM
EPPHELAQASPMRAGLSESPPEALPVESREQHKQVPVQAEASASQEIVPAIPSSSKSVRF
PLRPGKGSIGTRCLVKANHFFAELPDKDLHQYDVSITPEVTSRIVSRAVIKELVNLYKGS
YLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDNGSGSERRRRNFKVVIKFAARADL
HRLGLFLDGRHAEAPQEALQVLDIVLRELPSARYAPFGRSFFSPDLGRRQPLGDGLESWR
GFYQSIRPTQNGLSLNIDMSATAFIEPLPVTEFVMQLLNSDIHSRPLSDAERVKIKKALR
GVKVEVTHRGNMRRKYRISGLTTQATRELTFPVDEGGTMKSVVQYFQETYGFAIQHTYLP
CLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQHPRDRERDIIRMVKHN
AYDKDDYAQEFGIKISDHLASVEARILPAPRLKYNESGREKDCLPRVGQWNMMNKKMVNG
GKVKSWMCVNFARNVQESVVRGFCHELAVMCQASGMDFARDPVLPPLNARPDQVERALNA
RYHDAMNVLGPQRKELDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNKQ
ILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVV
ASQDWPEVTKYAGLVSAQAHRQELIEDLYKVWQDPQRGTVSGGMIRELLISFKRSTGEKP
QRIIFYRDGVSEGQFYQVLLYELNAIRKACASLEANYQPKVTFVVVQKRHHTRLFAHNHN
DKNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADAL
QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSVASGPVGRGSQSA
SRGTRAPGGAVVRQLPALKDNLKRVMFYC
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaaggaggccaaggcagcatcctggtagtggtgagggctcacaggctccagag
cctggtggaagaggaggctcagggagaggtggtcgtgctcatggcgccccatatgctcaa
caggtactgcaaggaggtcgtggcgggaaccaggggcggagtggagggcgtcaatctcgt
gttgatgaagcccagcagcaacagcaaaggggtcgtcctggagagtatccagggagggga
caggtgcgtggcggaacacggccacaacagtacccccgtggtggtagaggtgggcatggg
gctggcctgccatccaccgagtcatcaagccctttagctcccgagctgcgccaagcaatg
gaacctccacatgagcttgctcaagcctcaccaatgcgggcaggcctgtcagaatcacca
ccagaggctttgcctgtcgagtctagagagcagcataaacaagtgccagtgcaagctgag
gctagtgcaagccaggagattgtgcctgcaattccatcatcaagcaagtcagttaggttt
cctttgcgcccaggaaaaggtagcattggcaccaggtgtttggttaaggccaaccatttc
tttgccgagctgccagacaaggatcttcatcagtatgatgtctcaatcactccggaagtt
acatcacggattgttagtcgggccgtaatcaaggagctggtgaatctttacaagggatct
tatttgggtgggcggctaccagcttatgatggtaggaagagcctatacacagctggccca
ttgccgtttacttcacaggaatttcagatcactttacttgatgacgataatggctcgggt
tccgagaggcgacgtaggaattttaaagtagttattaaatttgctgcacgagccgacctc
caccgccttgggttgtttttagatgggaggcatgcagaagctcctcaagaggcattgcaa
gttcttgatattgtgctgcgggagctaccttcagcaagatatgcaccatttggccgatcg
ttcttttcacctgacttgggccgaaggcagccccttggtgatggattagaaagctggcgt
ggattttatcagagcattcgacctactcagaatggcttgtcactgaacattgatatgtca
gcaacggctttcattgagccattacctgtaactgaatttgtcatgcaactactgaattct
gacattcactcgaggcctctctcagacgccgaacgtgtgaagatcaagaaggccttgaga
ggagttaaggtggaagttactcatcgtggcaacatgcggagaaagtatcggatatctggt
ttaactactcaggcgactcgagagctaacttttcctgttgatgaagggggcacaatgaag
tcagttgtacaatacttccaagagacttatggctttgccattcaacacacctaccttcct
tgccttcaagttggcaatcagcagcgtccaaattacttgcctatggaggtctgcaaaata
gttgaaggacagagatactccaagagattaaaccagaatcagataagagctcttttggag
gagacatgtcagcatccgcgtgatagggagcgtgatataattcggatggttaaacataac
gcttatgataaggatgattatgcacaagagtttggcattaagattagtgatcatctggcg
tcagtagaggcacggattttaccagctccacggcttaagtacaatgaaagtggtcgagag
aaggattgcttacctagagttggtcagtggaatatgatgaacaagaaaatggtaaatggt
ggtaaagtcaaaagctggatgtgcgtcaatttcgcacgcaatgtgcaagaaagtgttgtt
cgcgggttctgtcatgaacttgcggtgatgtgccaagcgtcaggaatggactttgctcgg
gaccctgttcttccacctctaaatgcacgtcctgatcaagtggaaagagctctgaatgct
aggtaccatgatgccatgaatgttcttggaccccagcgcaaggaacttgatttgcttatt
ggaatactacctgataacaacggctcactttatggtgatttgaagcgtgtctgtgaaata
gatcttggaatagtttcgcagtgctgttgtacaaagcaggtgttcaaaatgaacaaacaa
attcttgcaaaccttgctctgaagataaatgtcaaggttgggggcaggaacactgtactg
gtggatgcagtctcaaggcggattcctctggtaactgacagacctacaatcatatttggt
gctgatgtcactcaccctcatcctggcgaggacagcagtccctcaattgctgctgttgtg
gcgtcccaagattggccagaagtgacaaagtatgctggtttagtctctgctcaagctcac
cggcaagagttgatagaggatttatataaggtttggcaagatccacagagaggaacagtt
agtggtggaatgataagggagctacttatatcctttaaaagatcaactggtgagaagccc
caacgaataatattttacagggatggtgttagtgaaggacaattttatcaagttctgttg
tatgagctcaatgcgatccgaaaggcctgtgcctccctggaagcaaactaccaaccaaag
gtgactttcgttgtggttcagaaacgccaccataccagattatttgctcacaaccacaat
gataagaattcaattgacaggagtgggaacatactccctggtacggttgtggattcgaag
atctgccatcctactgaatttgacttctacttgtgcagccatgctggcatcaagggcact
agccgtccagcacattatcatgtcttatgggatgaaaacaactttactgctgatgcattg
cagactcttaccaacaatctctgttacacttatgcaaggtgcacgcgctccgtatcgatt
gttccaccagcgtattatgctcacctggctgccttccgtgcccgtttctatatggagcca
gagacctctgacagtggttccgtggcaagtggccctgtaggccgtggttcgcaatcagca
tcccgtggtactcgtgcccctggtggtgcagttgttaggcagcttcccgctctgaaggat
aatttaaagagggtcatgttctactgctga
DBGET
integrated database retrieval system
