Phragmites australis (common reed): 133920172
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Entry
133920172 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133920172
KO
K12864
beta-catenin-like protein 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133920172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133920172
Spliceosome [BR:
paua03041
]
Complex B
Other components
Prp19 complex
133920172
Complex C
Prp19-CDC5 complex
133920172
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTNNBL
ARM_ARMC5
CCDC138_C
DUF6857
SEN1_N
PH_23
Cas_Cmr5
Motif
Other DBs
NCBI-GeneID:
133920172
NCBI-ProteinID:
XP_062220862
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All DBs
Position
5:complement(47005713..47009242)
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AA seq
514 aa
AA seq
DB search
MDAAAHKRKRIQDDDGEFDLSALEASAAADAVEVLDLRAAKRLLLAFERRLRDNLEARMK
YPDDPARFADSEIALHAEVERLRLLAGAPELFPDLVPIGLAPSLSSLLTHDNADLAAAAA
SLLADLTDSDDPSDLAGVQALADALVEANALDLLVHNLSRFSEADPDEAEAVHHTLAVLE
NLLDLRPHLADAVCDKTKVLRWLLARLKAREFDANKQYASEILAILLQNSPANQKRLGQI
NGVDGLLQAVAMYKSRDPKTSDEEEMLENLFDCLCCILMPMENKERFVKAEGVELMIIIM
KQKKLAYSSAIRTLDFAMTRFPPACERFVDVLGLKTVFAALMGKIPVNKKNKKESYQEEL
EERIISLIASLFGGITKGSRRIRLLGKFVENECEKIDRLMEFYTRYSDRVKEETERLDSL
DLEDLEMDDDERYNRKLEAGLYTLQLIALILGHILHSGNSQMRTRIELLLRQNKLTKQDV
KDILEEYHDNIGDLDGPEEKERAQARTKEILGAL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccgcccacaagcgcaagcgcatccaagacgacgacggggagttcgacctc
tccgccctcgaggcttccgccgccgccgacgccgtcgaggtgctcgacctccgggcggcc
aagcgcctgctgctcgccttcgagcgccgcctgcgcgacaacctcgaggcgcgcatgaag
taccccgacgaccccgcccgcttcgccgactctgagatcgccctccacgctgaggtcgag
cgcctccgcctcctcgccggcgcccccgagctcttccccgacctcgtccccatcggcctc
gccccctccctctcctccctcctcacccacgacaatgccgacctcgcggcagctgccgcc
tccctcctcgcggacctcaccgactccgacgacccatctgacctcgccggcgtccaggcc
ctcgctgacgccctcgtcgaggccaacgcgctcgatctcctcgtccacaacctctcccgc
ttctccgaggccgaccccgacgaggcagaggccgtccaccacaccctcgccgtcctcgag
aacctcctcgacctccgcccccacctcgcggatgccgtctgcgacaaaaccaaggtcctc
cgctggctcctcgcgcgcctcaaggcccgcgagtttgacgccaacaagcagtacgcctca
gagatcctcgccatcctcctgcagaatagccccgccaaccagaagcgactgggccagatc
aacggagtcgacggcctgctgcaggccgttgctatgtacaaatccagggacccaaagacc
tccgacgaggaggagatgctcgagaacctcttcgactgtctctgctgcatcctcatgccc
atggagaacaaggagaggtttgtcaaggcagaaggcgtcgagctcatgatcatcataatg
aagcagaagaagctggcctacagctccgccatccggacactggattttgccatgaccagg
ttcccgcctgcatgcgagcgctttgttgatgtgctcgggcttaagactgttttcgcagcc
ctcatgggtaagattcccgttaacaagaaaaacaagaaagagagttatcaggaggagcta
gaagaacgtatcatttcattgattgcttcattgtttggtggtatcaccaaaggctcaaga
aggatcaggctactaggaaaatttgttgagaatgaatgcgaaaagatagaccgtctgatg
gagttttacacaaggtattcagacagagtgaaagaagagactgaaagacttgatagtctt
gatttggaagatttagagatggacgatgatgagcggtacaaccgaaaacttgaagctggg
ctctacacactacagttaattgcacttattctgggacatatcttgcactctgggaattcc
cagatgaggacaagaatagagttgcttcttagacagaacaaactgacaaagcaggatgtg
aaggatatacttgaggaatatcatgacaacattggggatttggatgggcctgaagagaag
gaaagagcgcaagcgcgaacaaaggaaatcttaggtgcattgtga
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