Phragmites australis (common reed): 133920891
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Entry
133920891 CDS
T10575
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 2-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133920891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133920891
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
133920891
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
133920891
NCBI-ProteinID:
XP_062221481
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All DBs
Position
6:complement(640912..643876)
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AA seq
307 aa
AA seq
DB search
MRPPRGRGGGGRGFGGRGDGGGRGGGGRGFGGRGGRGDRGGRGGGGGRTPRGRGGRGGRG
VGMRGGSKAVVVPHKHDGVFISKSKEDALCTKNMVPGESVYGEKRVSVQNEDGTKVEYRV
WNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHVSDIVGPTGLVYAVEFSHRS
GRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDVAQPDQARILALNASYFLKN
GGHFVISIKANCIDSTMPAEAVFASEVDKLKADQFKPSEQVTLEPFERDHACVVGGYRMP
KKQKATS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaggccacctcgaggacgcggcggtggcggcaggggtttcgggggcagaggcgatggc
ggcggccgcggcggtggtggcaggggattcgggggtagaggcgggagaggagacagaggc
gggagaggtggaggcggtggcaggacgcccagaggccgcggtggtcgcggtggccgcggt
gttggcatgaggggcgggagcaaggcggtggtggtgccgcacaagcacgacggcgtcttc
atctccaaatccaaggaggacgctctctgcaccaagaacatggtccccggcgagtccgtc
tacggagagaagcgcgtctctgttcagaatgaggatgggacaaaggttgagtacagggtg
tggaacccctttcgttccaagctggctgctgccgtgcttggtggtgttgacaacatctgg
attgctcctggtacacgtgtgctgtatcttggcgctgcctcaggtacaactgtatctcat
gtgtctgatatcgttggaccgactgggttggtctatgctgttgagttctcacacaggagt
ggaagggaccttgtcaacatggctaagaagaggaccaatgtgatccccattattgaggat
gctaggcaccctgctaggtaccggatgttggttggcatggttgatgttatcttctctgat
gttgcacagccagaccaggctaggatcttagcccttaatgcctcgtacttcttgaagaat
ggtggtcattttgtcatttcgatcaaggcgaattgtatcgactccaccatgcctgctgag
gctgtctttgccagtgaagtggacaagctgaaggccgatcagttcaagccgtcggagcag
gtgaccctggagcccttcgagcgtgaccacgcatgcgtcgttggtggttacaggatgccc
aagaagcaaaaggctacgtcttaa
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