Phragmites australis (common reed): 133920900
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Entry
133920900 CDS
T10575
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133920900
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133920900
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133920900
03019 Messenger RNA biogenesis [BR:
paua03019
]
133920900
03041 Spliceosome [BR:
paua03041
]
133920900
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133920900
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
133920900
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133920900
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133920900
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133920900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
133920900
NCBI-ProteinID:
XP_062221511
LinkDB
All DBs
Position
6:755165..761801
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AA seq
316 aa
AA seq
DB search
MDPALLDDVIRRLLEVKNLKPGKNAQLSESEIKQLCAAAKEIFLQQPNLLELEAPIKICG
DVHGQYSDLLRLFDYGGYPPQANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRG
NHECASVNRIYGFYDECKRRFSVKIWKTFTDCFNCLPVAALIDEKILCMHGGLSPELNKL
DQILNLNRPTDVPDTGLLCDLLWSDPSNEAQGWAMNDRGVSYTFGPDKVTEFLEKHDLDL
ICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPARKML
AGSTNTKSGFKPLRGW
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcgttgctagacgacgtcatacggcggctgctggaggtcaagaatctgaag
ccggggaagaacgcgcagctgtcggagtcggagattaagcagctctgcgccgcggccaag
gagatcttcctgcagcagcccaacctcctggagctcgaggcccccatcaaaatctgtggt
gatgtccatggccagtattctgatctcctgaggctgttcgattatggtggatacccgcct
caggccaactaccttttcctgggtgattatgtggaccgtggaaagcaaagcctggaaaca
atatgccttcttttggcttacaaggtcaagtacccagaaaacttctttcttctaaggggc
aaccatgaatgtgcatcagtaaaccgcatctatggtttctatgatgagtgcaagcgcaga
ttcagtgtaaaaatatggaaaactttcacagactgttttaactgcttaccagtggcagca
ttgatagatgaaaagattctctgtatgcatggtggcctttctccggagttgaacaagctg
gatcaaatactcaacctcaatcggcccacagacgtgcctgacactggattgctctgtgat
cttctttggtctgatccttccaatgaagcacaaggctgggccatgaatgatcgaggtgtt
tcatatacatttggtcctgataaagtaactgaattccttgagaagcatgatttggacctc
atctgccgagcccatcaggttgtcgaagatggatatgagtttttcgctgaccgccaactt
gtaacaatattctcagcccctaactactgtggagaattcgataacgctggtgccatgatg
agtgtagatgagacgttgatgtgctccttccaaatactgaagcctgcgaggaagatgttg
gctggttcaactaataccaaatctggcttcaagcccttgagaggatggtga
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integrated database retrieval system
