Phragmites australis (common reed): 133920981
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Entry
133920981 CDS
T10575
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133920981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133920981
Transcription factors [BR:
paua03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133920981
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GFIT
Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
CENPU
Motif
Other DBs
NCBI-GeneID:
133920981
NCBI-ProteinID:
XP_062221639
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Position
6:1633957..1637401
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AA seq
296 aa
AA seq
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MTDGRDQLQQLDLIMRHQSMANICESEHALGSSESEPARPARPRGKRSRAAEVHNLSEKR
RRSRINEKMKALQNLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGLYLPPANLSG
APEPLAPSEMCATQLQSGVKASNSGVVLLPANQISAAHHSFDPPNHDQRQNKPLFLPSVP
NATTVEPQFLQESSQSNLQSSQSTLPPEMIFQQDMMLNHRLTSAQETPSVPGYKVKSVRQ
ETSIVNADHFDRISLRKEQSQDMPKNTESVLSMPYLHCLQSGDREAGLRAGSKLLP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgggcgcgatcagctgcagcagctggatttgatcatgcgccaccagagcatg
gctaacatctgcgagagcgagcatgcgctggggtcatcggagtcggagcccgcaaggccg
gcgcggccgcgcggcaagaggagccgcgccgccgaggtgcacaacctgtcggagaagagg
aggaggagcaggatcaacgagaagatgaaggcgctgcagaacctcatacccaactctagc
aagacggacaaggcctccatgcttgatgatgccattgaatacctgaagcagcttcagctc
caagtgcagatgttgtctatgaggaatggcctctatctgcccccagcgaacttatctgga
gcacctgagcctctggcaccttcagaaatgtgtgccacacaacttcaaagtggtgtcaag
gcatcaaattctggggttgttctgctgccggcgaaccaaatttctgcagctcatcattca
tttgatccaccaaatcatgaccaaaggcaaaataaaccacttttcttaccaagtgttcct
aatgcaaccactgtagagcctcagtttcttcaagagtcatcacagtccaaccttcaatcc
tctcagtcgactttaccccctgagatgatcttccagcaggatatgatgttaaaccatcgc
ctaacttcagctcaagaaaccccatctgtgccagggtataaggtgaagtctgttagacag
gaaacgtccatagtgaatgctgatcattttgatagaatatcgctcaggaaagaacaatca
caagacatgccaaaaaacactgaaagtgtactatctatgccgtacttgcattgcttgcaa
agtggtgaccgtgaagcaggcctgagggcaggatcaaagttacttccatga
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