Phragmites australis (common reed): 133921016
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Entry
133921016 CDS
T10575
Name
(RefSeq) serine/threonine-protein kinase VPS15-like
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133921016
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
paua01001
]
133921016
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133921016
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133921016
Protein kinases [BR:
paua01001
]
Serine/threonine kinases: Other
VPS15 family
133921016
Membrane trafficking [BR:
paua04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133921016
Autophagy
Autophagosome formation proteins
PI3K complex
133921016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
EIF3I
HEAT
Beta-prop_TEP1_C
PK_Tyr_Ser-Thr
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
DUF7691
Tti2
Kinase-like
Cohesin_HEAT
APH
TCAD9
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
133921016
NCBI-ProteinID:
XP_062221696
LinkDB
All DBs
Position
6:1982801..1993001
Genome browser
AA seq
1469 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRGRFLKSVRCKHDEGLLLVKVYFKRA
GEPIDLKEHERRLERIRNAFKGIEGSHVWPFQVWLQTDKAAYLLRQYFHNNLHDRLSTRP
FLSQIVKKWLAFQLIHAVEQSHSKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDD
DPSDFSFYFDTGGRRRCYLAPERFYEHGSEAQVAADAPLQPSMDIFSLGCVLAELFLEGQ
PLFELSQLLAYRRGQYDPMHTLEKIQDSGIRDMILHMTQLDPKERLSCRSYLQKYESVVF
PIYFSNFLHKFFSDIVPLDSDTRVEKTQENFEKIHEIMMSGSAIEQIVGSTLCENKELSE
EKGIRRQMTNSPGDSAKNTYVVKKNIPIDHQQIVGDLNFLLKEVEHRSNHTCTKVTQGMD
HFVASSNSCASVIQAGRQIGSGLMGQNNAVSYVQKISKSNLRSLVAGYDGQSDTYSFDIF
QQIGSKVTCEGMVLLASLLCSCIRSVKKPELRRTSLILLKFSSTYIDDDSRLQLVVPYVI
AMLSDPAAIVRCAALETLCDVLCLVQDFPISDAVIFLEYILPMLSLLPDDAEESVRVCYA
SNIHKLALTAYRFLLRSCSMTDIGPLDESVVALRSQSTESPVKKQDKIDGQLADLRKSIY
EIVQELVMGQKQTPNVRRALLQDIGYLCYFFGHKQSNDFLLPILPAFLNDRDEQLRAVFF
GQIVFVCYFIGSRSVEEYLLPYLEQALSDAMEAVLVNALDCLTMMCKSGYLRKRVIVGLF
GKALPLLCYPINWVKRSAVRLVAACSESLGSVDTYVYLSPHLRHFLHREPPSLTSETALL
SCLKPPVSKSVLYQALEDSQDMGDILLKNGGKKELTVHGVRYPATVQSRSSTILEDAARL
RSPNISSNMSLDIKDSVSSDKSLYSGFALHASAGNSSFYDGLSKGIPSYSVFTDKRGLGE
THMVPDSSVYKASIRLPWLEPNRPGVQTRDDHFSSKRRDLSINDSMKSSSSLPEDSISNS
DTPGLPSFTRSGVALETGWRPRGVLVAHLQEHRLSVNDIAVSNDNTFFVTASDDSSIKIW
DSRKLEKDIAFRSRLTYSLGSSRALCTEMLHGTSQVAVGASDGTLHLFSVDCARGVGSVV
ERYSGIVDVKRKDMKEGAILSVVNCSSDSFSPTVLFSTEHCGIHKWDTRTNSESWSFKSS
PGQGYISALVVGQCGNWFISGSSRGVLTLWDNRFLLPVNSWNYSTVSPIEKLCLLIPPPN
SISSSGRPLVFVAAGCNEVSLWNAENGSCHQMFRTASTENEGVMPKAPSRPLNKSSTKDA
RRTGNYKYRIDELNDPPARRPGIRSLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCIAGP
LEKEIDPSAKGVGNGECYDIRSSFGVQVVQEICKKPTSASGLTHKTRLAMAAADSAGCHR
DAILALASFNLSSQRLISASRDGAIKVWK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcgcggacgacgcaggcgtcggcgacggagtactacctccacgac
ctcccgtccacctacaaccttgtgctcctcgatgtcgtcagccgcggccgcttcctcaag
tccgtccgctgcaagcacgacgaggggctcctcctcgtcaaggtctacttcaagcgcgcc
ggcgagccaatcgacctcaaggagcatgagcggaggctagagcggatcaggaacgcgttc
aaggggattgaggggtctcacgtctggcccttccaggtttggttacaaacagataaggcg
gcatatctcctgaggcagtacttccacaacaacctgcacgatcgactaagcacacgccct
ttcctcagtcagattgtgaagaaatggcttgctttccagttaatccatgccgtggagcag
agccatagtaagggagtttgccatggtgacataaaatgtgaaaatgtactcgttacatct
tggaattggttatatcttgcggactttgcatctttcaaaccgacttacatcccggatgat
gatccgtctgatttttcattctactttgacactggaggaaggcgaagatgctatctggcg
cccgaaagattctacgagcatggtagtgaggcccaagttgcagctgatgcacctctgcag
ccatctatggatatattttctctcgggtgtgttctcgctgaacttttcctagaaggtcag
ccactatttgagctttcacaacttttggcttatcggcgtggtcagtatgaccccatgcat
accctagaaaagatacaagattctggtattcgtgacatgatacttcacatgacccaattg
gacccaaaagaaaggctgtcatgtagaagctatctgcaaaaatatgaatctgttgtattc
ccgatttatttttcaaattttttgcacaagttcttctcggatattgttccacttgactca
gataccagggtcgagaagacacaagaaaattttgaaaagatacatgaaataatgatgagt
ggctcagcaattgaacaaattgtgggatctactttgtgtgagaataaggaactatctgag
gaaaaaggcatcagacggcaaatgacaaactcaccaggagattctgcgaaaaacacatat
gtagttaagaaaaatattcctatagaccatcaacagattgttggagatctcaatttcctc
ctcaaagaagtggagcacaggagcaaccacacatgcacaaaggtaacacagggcatggac
cattttgttgcttcaagcaattcctgtgcaagtgttattcaagcaggaagacaaattgga
agtggtttgatgggccagaacaatgctgtatcctatgtgcagaagatctcaaagagtaat
ttacgctccttagtggctggttatgatggccaatccgatacctatagctttgacattttt
caacagataggctccaaggtgacctgtgaaggcatggtcttgcttgcctcattactctgt
tcatgcatacgcagtgtgaaaaaaccagagcttagaaggaccagtctcattcttctgaag
ttttcttccacatacatagatgatgatagtcgcttacagctagtggttccctatgtgatt
gcaatgctttcagatccagctgccattgttcgctgcgctgctttggaaaccttatgtgat
gttctctgtcttgttcaagactttcctatcagtgatgcagtgatattcctggagtacatc
ctcccaatgctctctttgctccctgatgatgcggaggagagtgttagagtttgctatgct
agcaacattcataagctggctttaacagcttatagattcctactccgttcttgtagcatg
actgatattggtcctctagatgaatcagtggtagctctcagatcacagtccactgaatca
ccagtgaagaagcaagataaaattgatggtcaacttgcagatcttaggaaatctatttat
gaaatagtacaagagttggtaatggggcaaaagcagacacctaatgtccgtagagctctt
ctacaggatattggttatttgtgttacttctttgggcacaaacaaagtaatgattttctt
cttcctatacttccagcatttctaaatgaccgtgatgagcagctccgtgcagttttcttt
ggtcagatcgtctttgtttgctattttattggttcaagaagtgttgaggaatatcttttg
ccatatcttgaacaggcactaagtgatgctatggaggctgtgcttgtaaatgcacttgat
tgcttgaccatgatgtgcaaaagtggttatttgaggaaaagagtcattgttggcctattt
ggaaaggctcttcccctgctctgttatccgatcaattgggttaaacggtctgctgtaaga
cttgttgctgcttgcagcgaaagcttagggtctgtagatacttatgtatatctttctcca
cacctaaggcatttcctacacagggaaccaccttcattgacctctgaaactgctcttctt
tcatgtcttaagcctccagtctcaaaatcagtcttataccaagctttagaggattctcag
gatatgggagacattttactgaagaatggtggcaaaaaagaactgacagttcatggtgta
agataccctgctacagtacaaagtagatcctcaaccattcttgaagatgctgcaagattg
agaagccctaatatttccagcaacatgtctttggacatcaaagattcagtttcttctgat
aaatcattatattctggctttgcattgcatgcatctgctgggaatagttccttttatgat
ggcttgtctaaaggaataccatcttactctgtttttactgataagcgtggtttaggagaa
acacacatggtccctgattcgtcggtgtacaaagcttcaataaggctaccttggttggaa
cccaaccgtccaggcgtgcagactagagatgatcatttcagtagcaagcgccgagattta
agcatcaatgactctatgaagagcagctcctctttgccagaggatagcatttcaaactct
gatactccaggattgccgtcgttcaccagatcaggagtggccctggagactggatggagg
ccacgtggagttttagtggcacatctacaggaacatcgcttgtctgtcaatgatatagcc
gtatcgaatgacaataccttttttgtgactgcttcggatgattcaagtatcaagatatgg
gattcaagaaagttggaaaaggacattgccttcagatctaggctaacatatagcctgggt
agtagccgagctctatgtacggaaatgcttcatggcacttctcaggttgctgttggtgcc
agtgatggtacattacacttgttttctgttgattgtgcacgcggcgttgggagtgttgtg
gagaggtattctggcattgttgatgtaaaaaggaaagatatgaaagaaggtgcaattctc
agtgttgtaaattgttcatctgacagttttagcccaaccgtccttttcagcacagaacat
tgtggcatccataaatgggatacacggaccaactcagaatcttggtcatttaaatcctca
ccaggtcagggctatatatcagcacttgtagtgggtcagtgtggaaactggttcatctca
ggttcttcaagaggtgttcttacattgtgggataacaggtttttgctgcctgttaactca
tggaactactccactgtcagccctatagagaaattgtgcttgcttataccaccaccgaat
tcaatatcttcttctggaaggccattggtttttgttgccgcaggctgcaacgaagtttcc
ctatggaatgctgagaatggtagttgtcaccagatgtttagaacggcgagcacagagaat
gaaggtgtgatgccaaaggcaccttcaagacctcttaacaagtcaagtaccaaagatgcg
agacgaacaggaaattataagtacagaatcgatgaattgaatgacccacctgcacgtcgt
cctggcatccgctctttgcttcccttaccaggtggcgacctattgactggaggaacagac
ttgaagattcgttactgggaccaggccagacctgagcaaagcttctgtattgctggtccc
ttggaaaaagaaattgatccctcagcaaaaggagttggaaacggcgagtgttatgatata
agatccagttttggagtacaagttgtgcaggaaatatgcaaaaagcctacctcggcttct
gggttaacgcacaagactcggctcgcgatggccgctgcagattccgccgggtgccaccgt
gacgctatactcgcgctggcgtccttcaacttgtcgagccaaaggttgatatcagccagc
agagacggtgccatcaaggtgtggaaatag
DBGET
integrated database retrieval system
