Phragmites australis (common reed): 133921024
Help
Entry
133921024 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133921024
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133921024
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133921024
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133921024
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133921024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
YceD
Motif
Other DBs
NCBI-GeneID:
133921024
NCBI-ProteinID:
XP_062221708
LinkDB
All DBs
Position
6:complement(2088570..2096113)
Genome browser
AA seq
1054 aa
AA seq
DB search
MGESGAEGLMHRRIEFHAATKPRAAAAVDVPGGFRMERLFAGADKRVAAAAAARSDGEGR
RLEKWESSGSGFDPELSAARIYLRRIGAGLHNLGNTCYLNSVLQCLTYTEPFVAYLQSGK
HKSSCRTAGFCALCALQNHVKCALQSTGKILTPMQFIKNLRCISHSFHNYRQEDAHELMV
NLLELMHKCCLPSGIPSESPSAYEKSLVHRIFGGRLRSQVRCTRCSHCSNKFDPFLDLSL
EIGNAATLMKALENFTEEELLDGGEKHYNCQHCKQKVVAKKRFTIDKAPSVLTIHLKRFS
PFNPLQKIDKKVDFQTTLNLKPFVSNSEGMDLKYSLYGVLVHAGWNTQSGHYYCFVRTSS
GIWHNLDDNQVRQVREGDVLRQKAYMLFYVRDRVRSSVIHRDNGVYSLPDKKMIPEKIAF
MDGAIRNGLVETALNACSFTNEDTKLQKQNPDNGHPSNFCNALQDQCSNAYSKTEVIEAS
TSQNNEPASVQQALCPHPDGAATLFTKTNQITSDSQREPDACILHDASCDQKTCEKTLRD
LQLKSDGSLTDSGKDIAAVSFPICNGSDGLLGANNQATEPQTDPFCKPTSDSDTVTIAQI
IPTEDTAVSNETVSTHEDSTSGNEAKETEPIKQHDEVAVVKERSVKIIDEKENADEQASL
PNKLEDGQALVKKLSVMDTDRTADAEEQASVPNKLEDGQALVKELSVMDTDHMADAEEQA
SVLNNTLEDGQALVKELSVMDTDHMAGADEQISVQNNLLDIGQVNSENKISEDSAQVVCS
EDCAQAMCSEDSVQVLDKYPCHGNLHKNMKIKSKKHVKYPVVNLFFGSKQLLLASLKVRK
KRKQRRTKKQSRSSMDIESIANDQQTSTSETVLTSGISCKSYRRKRSHNTASSEDGAQIF
YKKQNLGDSISAADRTMDKKDSKDATLASAELASSCPSSVANADSGKCTYTNENVSWHFN
LLTRGLREITVPRWDDNDMPNTTAKELQYLSSTSIGYVLDEWNEEYDRGRRKVRKSKGDF
SGPNPFQETASIRSRPRMRLKADQARSGNQPLRI
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtcgggcgcggaagggctgatgcaccggaggatagagttccacgccgccacg
aagccccgtgcggcggcggctgtggacgtgcctggagggtttcggatggagaggctcttc
gcgggcgctgataagcgcgtggcggcggcggcggcggcaaggagtgatggggagggcagg
aggttggagaaatgggagagtagcgggagtggattcgatccggagctcagcgcggcgagg
atctacctgcggagaattggggctggcttgcacaacctcggcaatacgtgctacctcaac
tcggttctgcagtgcttgacatatacggagccgttcgtggcctacttgcagagcggcaag
cacaagtcctcatgtcggactgctggattctgtgcattatgtgctcttcagaaccatgtt
aagtgtgctctacagtcaactgggaagattttgacaccaatgcagtttatcaagaactta
agatgcatttcacatagttttcacaattataggcaggaagatgcgcatgagctaatggtc
aacttgcttgagttgatgcacaaatgctgtttaccttctggtataccaagtgagtctcca
agcgcttatgagaagagtctagttcacagaatatttggtggccgcttaagaagtcaggtg
agatgtacaaggtgctcacactgttccaacaaatttgatcctttcctcgatctcagtctt
gaaattggcaatgccgccacattgatgaaagcacttgaaaattttaccgaggaggagcta
ttagatggtggggaaaaacactacaactgccagcactgcaagcagaaagttgtggccaag
aaaaggtttactattgataaggctccttctgttttgacgattcatctgaagcgctttagt
cctttcaaccctcttcaaaagattgacaaaaaggtggattttcaaacaacgttaaacttg
aagccatttgtcagcaattctgaaggtatggatctcaaatatagcctttatggtgttttg
gttcatgctggttggaatacacagtcaggtcattattattgctttgttcggacgtccagt
gggatatggcacaatcttgatgataaccaggtccgccaagtccgtgagggagatgtactg
aggcagaaagcatacatgctattttatgtgcgtgacagagtaaggagctcggttattcat
agagataatggcgtttacagtttgccagataagaaaatgatccctgagaagatagcattt
atggatggtgcaattagaaatggtttagtggaaacagcattgaatgcttgttcatttacc
aatgaagatacaaagttgcagaagcagaacccagataatggtcatcccagcaatttttgt
aacgctttgcaagaccagtgttcaaatgcatatagcaaaactgaagttattgaagcttca
acatcccaaaacaatgagccagcttcagtgcagcaagccctttgccctcatccagatggt
gctgctaccctgttcaccaaaacaaaccaaataacatcagatagtcaaagggagcctgat
gcttgtattcttcatgatgcaagctgtgatcagaagacatgtgagaagacattgcgggac
ctgcaactgaaatctgatggttcactcactgattcaggcaaagacatagctgctgtttcc
tttccaatatgcaatggctctgatggattattgggggcaaacaaccaggctactgaacct
caaacagatcctttttgcaaaccaacttctgatagtgatacagtgactattgcacagatc
atcccaactgaggatactgctgtttctaacgaaacagtatcaacccatgaagattctacc
agtggtaatgaagctaaagagacagagcctattaagcaacatgatgaggtagctgtggtg
aaggagcgttctgtgaaaatcattgatgagaaagaaaatgcagatgaacaggcttctttg
ccgaacaaactggaggatgggcaggctttggtgaagaaactctctgtgatggacactgac
cgtacggctgatgcagaggagcaggcttctgtgccaaacaaactggaggatgggcaggct
ttggtgaaggaactctctgtgatggacactgaccatatggctgatgcagaggagcaggct
tctgtgctaaacaatacactggaggatgggcaggctttggtgaaggagctctctgtgatg
gacactgaccatatggctggtgcggatgagcagatctccgtgcagaataatttactggac
attggacaggtcaactctgagaataaaatctctgaagactctgcacaggtggtttgctct
gaagattgtgcacaggctatgtgctctgaagactctgtgcaggtgctagataaatatcca
tgccatggcaatttacataaaaacatgaaaatcaaatcaaagaagcatgtgaagtatcca
gttgtcaacttgttttttggatctaaacaactgttgttggcttcactaaaagtgcgcaag
aaaaggaaacagaggagaactaaaaagcagtctagatcttctatggacattgaaagcatt
gccaatgatcagcagacatcaacatcagaaactgttcttactagcggcatatcatgtaaa
tcctatagacggaaacgctcacataacactgcaagttctgaagatggtgcccagattttt
tacaagaaacaaaatcttggagactccatcagtgctgctgaccgtaccatggacaagaaa
gacagcaaggatgcaacgcttgctagtgctgagctagcaagctcatgcccaagctctgtg
gcaaatgctgattcaggaaaatgtacatatacaaatgagaatgtttcctggcattttaat
ctcctcacaaggggtttaagagaaatcactgttccacgatgggatgataatgacatgcca
aataccacggcaaaagagctgcaatatttgagttccaccagcattggttatgttttagat
gaatggaacgaggagtacgatcgtggaaggaggaaggtcaggaaatcaaagggagacttc
agtgggccaaaccctttccaagagacggcaagcatcagatcacggccgaggatgagacta
aaagctgaccaggccagatctggtaaccagcctctcaggatatga
DBGET
integrated database retrieval system
