Phragmites australis (common reed): 133921097
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Entry
133921097 CDS
T10575
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
paua Phragmites australis (common reed)
Pathway
paua03030
DNA replication
paua03420
Nucleotide excision repair
paua03430
Mismatch repair
paua03440
Homologous recombination
paua03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133921097
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
133921097
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
133921097
MMR (mismatch excision repair)
133921097
DSBR (double strand breaks repair)
HR (homologous recombination)
133921097
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133921097
NCBI-ProteinID:
XP_062221821
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Position
6:2983418..2986781
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AA seq
657 aa
AA seq
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MASAAAKLTPNAVPTALAGDTNLRPVVQVVDLRSIAVSGPPGSGPRFRAIVSDGAATTTA
LLAAQLCDLARSGLVRRGAIVQLLEYLVNNVNGRRVMVILNMEVLVPEREIIGNPVMPAE
LGVSNSNSMGIDQLNGASRHGSMAGSTLNTVTRPTDNAPVIQRSMAGNSSNMGTTPSDNA
QVFQPTVQPSYRPAPSYRNHGTIMKNEAPARIIPISALNPYQGRWAIKARVTAKGEIRRY
HNTKGDGKVFSFDLLDSDGSEIRVTCFNALVDRFYEAVEVGQVYVVSRGNLKPAKKDYNH
LKNEWEIFLESQSTIELCPDENSSIPAQRFSFTSIDKIEDAQNNAILDVIGVVTSVNPST
TIQRKNGMETQKRTITLKDMSGRSVEVTMWGDFCNREGSQLQEMVESGAFPVLAVKAGKV
NDYSGKSVGTISSSQLLINPDLAEAHSLRQWFDCGGRAASTQSISRDFTPAASRNEIRKT
VAQIKDDGLGMGDKPDWVTVKAAIIFFKTDSFCYTACPNVVGDRQCNKKVTKSDAGNWLC
DKCNQEFPECDYRYLLQLQIQDHSGTTWATAFQESGHELLGCSARELYMYKENDDPRYAD
ILLQCLYHQYLLRLKVKEETYGDERRVKNTVAKVERVDPSAESKFLIDCISKLTASY
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggcggcgaagctgacccccaacgccgtgccgacggcgctggcgggggac
accaacctcaggccggtggtgcaggtcgtcgacctccgcagcatagcggtcagcgggccc
cccggctcggggcccaggttccgcgccatcgtctccgacggcgccgccacgacgaccgcg
ctgctcgccgcgcagttatgcgacctcgcgcgctccggccttgtccgccgcggcgcaatc
gtgcagctactggagtacctcgtcaacaacgtcaatggcagaagggttatggtcattctg
aacatggaagttcttgttccagaacgtgagattattgggaatccagtaatgcctgctgag
cttggagtttctaattcaaattccatgggaatagaccagttaaatggagcatctcgacat
ggttcaatggcagggagtactttgaacacagtgacaaggcccactgacaatgctccagta
atccagcgttcgatggcagggaactcttcgaacatgggcactacgccaagcgacaatgct
caggtcttccaaccaacagtacagccatcctatcgccctgcacccagttacagaaatcat
ggcacaatcatgaaaaacgaagcccctgctagaataatcccgatatctgctctaaatcct
tatcagggccgctgggctatcaaggctcgagttactgccaagggagagatccgccggtac
cataacacaaaaggtgatggcaaagtgttctcttttgaccttcttgattctgatggcagt
gagatacgggttacatgtttcaatgctcttgttgatcgcttctatgaagctgtggaagtt
ggtcaggtctatgtggtatcaagaggaaacttgaaacctgcaaagaaggactacaaccat
cttaagaatgagtgggagattttcttggaatctcagtcaaccattgaactttgtcctgat
gagaacagctccattcccgcccagcggtttagcttcacatcaattgataaaattgaagat
gcacagaacaatgctattcttgatgtcataggtgttgttacatctgtcaaccctagtacc
acaatacagaggaaaaatggcatggaaactcagaaaaggacaattaccctgaaggatatg
tctggtcgaagcgttgaggttaccatgtggggtgacttctgcaacagagaaggctcgcag
ctgcaagaaatggttgaatctggggcctttcctgtactggctgtcaaagctggaaaagtg
aatgattacagtggcaagtctgttggcacaatttcttcatctcaactcctcataaaccct
gatcttgctgaagctcatagtctcaggcagtggtttgattgtggaggaagagctgcttct
actcagtccatatctagggatttcactcctgcagcatcaaggaatgagatccgaaagaca
gtagcacagataaaggatgatggtctgggaatgggggacaaacctgattgggtcactgtg
aaggctgctattatattcttcaagaccgactccttctgctacacagcttgcccgaacgtg
gttggcgacaggcaatgcaataagaaggtgacgaagtctgacgcaggcaactggctctgt
gacaagtgcaaccaagagtttccagagtgtgattacaggtatctcctgcagttacagatt
caagatcactcaggaacaacctgggcgacagcatttcaagagtctgggcatgaactactt
ggttgctcggcacgagagctctacatgtacaaagagaacgacgatcctcgctatgcagat
attttgctccagtgcttgtatcatcagtatttgctgaggctgaaagtcaaagaagaaaca
tatggcgatgagcgacgagtgaagaacaccgtggccaaggtggagagggtggatccttcg
gctgagagtaaatttctgattgattgcatttcaaagttgacagcatcatattaa
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