Phragmites australis (common reed): 133921109
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Entry
133921109 CDS
T10575
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
paua Phragmites australis (common reed)
Pathway
paua04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133921109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
paua04040
]
133921109
Ion channels [BR:
paua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133921109
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
DUF6525
Motif
Other DBs
NCBI-GeneID:
133921109
NCBI-ProteinID:
XP_062221837
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Position
6:complement(3126038..3134022)
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AA seq
763 aa
AA seq
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MTDQERDDVPMLLRNVELPRFPLRSTSMCIPVRDDEYEEDTFVPHTGPLFIQPPIQTAPG
IPCTSRDTPNRLPRPSQGKQVNKPHAVMPEEIGGNRWSYSGQVPKNEHLMMSGPLGQCDN
PDCVNCPPACKNRRHFHRGPNALDNKLHNIRYGHNGGWKKKIEQILSYIPIMNPHAKVVQ
QWNQFFVISCLISIFIDPLFFFLLSINQDNKCIVLNWNFATALAVVRSVTDAIYFLHMLL
QFRLAYVAPESRVVGAGDLVDEPKKVAVHYLRGYFLLDFFVVLPLPQVMILLVIPKFVGL
SAANYAKNLLRVTVLLQYVPRIIRFVPLLDGQSANGFIFESAWANFVINLLMFVLAGHVV
GSCWYLFSLQRVNQCLRDACSASTIPYCYSFIDCGHGFNIEGQSGPNRQQWFNDSGAIAC
FNTGDGATFQYGIYGQAVMLTTEPSAVKRYIYSLFWGFQQISTLAGNLVPSYFAWEVLFT
MAIIGLGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEKWMSHRRLPEDLRRRVRRAE
RFTWAATQGVNEEELLGNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQNL
YIAGSDILYQGGPVEKMVFIVRGKLESISADGSKAPLHEGDVCGEELLTWYLEHSSVNRD
GGKIKFHGMRLVAIRTVRCLTNVEAFILRASDLEEVTSQFARFLRNPRVQGAIRYESPYW
RTIAATRIQVAWRYRKRRLKRAEQSRLNEQSYPLYSNMAHDAF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaggagagagatgatgttcctatgttgctaagaaatgttgagctaccaagg
tttcctctaagaagtacttcaatgtgtataccagtcagggatgatgaatatgaagaagac
acctttgtaccccatactggtcctctattcatccagccaccaattcagacagcaccaggc
attccatgtacaagtagagacacaccgaacaggctgcctagaccttcacagggaaaacaa
gtcaacaagccgcacgcagtcatgccagaagaaattggaggaaataggtggtcttacagt
ggacaagttccaaagaatgaacacttgatgatgtctggacctttgggacaatgtgataat
cctgattgtgtcaattgccctcctgcttgcaaaaatagaagacatttccacagaggcccg
aatgctttagataataagcttcataatattcgttatggtcataatggtgggtggaagaag
aagattgagcaaatcctctcatacattccgattatgaacccacatgcaaaggttgttcag
cagtggaatcaattcttcgtgatatcatgcctgatttccattttcatcgatcccttgttc
ttcttcctattatcaatcaatcaggataacaaatgcatagtgttaaactggaattttgct
acagcacttgctgttgtcagaagtgtgactgatgctatttattttcttcacatgcttctt
cagttcagattggcttatgttgctccagagtcacgagtggtgggagctggagatctagtt
gatgagccaaagaaagttgctgtccattatcttcgtggttactttttactcgatttcttc
gttgtgcttccactccctcaggtgatgatactgctagttatccctaaatttgtcgggtta
tcagctgcaaactatgctaagaatttattgcgcgtcactgttcttcttcaatatgtgccc
cgcatcatcagatttgtaccattacttgatggtcagtctgccaacggattcatattcgag
tcagcttgggccaattttgtcatcaaccttctaatgtttgttttggcggggcatgtcgtt
ggttcatgttggtatctctttagcttacagagggttaatcaatgcctacgagatgcttgt
tctgcatcgaccattccgtattgttattcttttatagactgcgggcatggcttcaacatt
gagggacagagtggaccgaacaggcagcagtggttcaatgactcgggcgcaatagcttgt
tttaacactggagatggtgctacattccaatatggaatttatgggcaggctgttatgcta
actacagaaccaagtgctgttaaacggtatatatattcattgttttgggggtttcagcaa
ataagtaccttagctggcaatcttgtcccaagttactttgcatgggaagttctgtttact
atggccattattggtttgggactgttgcttttcgcattgcttatcggaaacatgcaaaat
tttctccaagctcttggaagacggagattagaaatgcaacttaggcgccgtgatgttgaa
aagtggatgagccatagacgattgcctgaagatttgagaaggagggttagacgagcagaa
aggttcacctgggcagctacccaaggagtgaatgaagaggagcttttaggtaatttacct
gaagatatccagagggacatacgccgtcatttctttagatttcttaataaggtccgatta
ttcaccttgatggattggcctatcttggatgctatctgtgacaaattaagacagaattta
tatatcgccggaagtgacattctttatcaaggtggtcctgttgaaaagatggtcttcata
gtgagaggtaagctggaaagcatcagtgcagatggaagcaaggctccgttgcatgaagga
gatgtatgtggagaggagctcctgacatggtacttggaacactcttcagtgaatagagat
ggtgggaaaatcaaatttcatggtatgcggttggttgctatacgtactgtaagatgttta
acaaatgttgaagcttttatacttagagcaagcgatcttgaagaagtcacatcacagttt
gcacgattcttgcgtaatccacgagtgcaaggagcaatcaggtatgaatctccctactgg
agaaccattgctgcaactcgtattcaagttgcatggaggtatcggaaaaggcggctgaag
cgagctgagcagtcaaggttgaacgaacaatcgtaccccttgtattccaacatggcgcat
gatgctttttag
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