Phragmites australis (common reed): 133921164
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Entry
133921164 CDS
T10575
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133921164
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133921164
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133921164
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
133921164
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class II (U)
133921164
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133921164
Prokaryotic type
133921164
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA-synt_2
tRNA_synthFbeta
PheRS_DBD2
tRNA-synt_2b
DUF465
Motif
Other DBs
NCBI-GeneID:
133921164
NCBI-ProteinID:
XP_062221918
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Position
6:complement(3861217..3868527)
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AA seq
499 aa
AA seq
DB search
MTEKSPAGDVEAGLLAHLNSAGEVSDSRSFASSLGVSHAELEGVIKSLSAFRIVDSTDIT
KETWVLTEEAKGYAARGSPEAQLVAAIPPEGASKDALKAKLGEAFDVGMKAAARNKWIGF
EKGNKDLVLRKVENVKDELQDQLKRLENGEVVPDKVIDDLKRRKLITKEKSIWYSLKKGP
EFVIKRKTLATDVTTEHLRSGDWKDLEFKDYNYGAQGQPIAKGYAHPLLEVREEIQNIFI
KMGFTEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLNAPAATKQLPEDYLEKVKQV
HQSGGYGSKGYGYDWKRDEAEKNLLRTHTTAVSTRMLYKLAQEKPFAPKRYYSIDRVFRN
EAVDRTHLAEFHQIEGLICDYGLTLGDLIGVLEDFFSSLGMSKLRFKPAYNPYTEPSMEI
FSYHDGLKKWVEVGNSGMFRPEMLLPMGLPDGVNVIAWGLSLERPTMILYGIDNIRDLFG
PKVDFNLIKSNPLCRLGLQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaagtcgccggcgggggacgtggaggccggcctcctcgcgcacctcaactcc
gcgggcgaggtctccgactcccgctccttcgcctcctccctcggcgtctcccacgccgaa
ctcgagggcgtcatcaagagcctttccgctttccgcatcgtcgacagcaccgacatcacc
aaggagacatgggtgctcaccgaggaggccaagggctacgccgcgaggggctcccctgag
gcgcagctcgtcgctgccatcccgcccgagggcgcctccaaggacgcgctcaaggcgaaa
ttgggggaagcgttcgacgtcggcatgaaggcggctgcgaggaacaagtggattgggttc
gagaaggggaacaaggacttggtcctcaggaaggttgagaatgtcaaggatgagttgcag
gatcagcttaaaagactagagaacggggaggttgttcctgataaagtgattgatgatttg
aagagaagaaagcttattacgaaagagaaatcaatttggtactcactaaagaaaggaccc
gagtttgttataaagaggaaaacattggcaactgatgtgacaacagaacaccttaggagt
ggtgactggaaggaccttgaattcaaagattataattatggagctcaagggcaacctata
gccaaaggttatgcacatcctttattggaggttcgtgaggaaatccagaacatctttatt
aagatgggatttactgagatgccaaccaacaatttcgttgagagcagcttctggaatttc
gatgcactgttccagccacaacagcatcctgctcgggattcccatgatacatttttcctg
aatgcccctgcagctacaaaacagctgcctgaggactatcttgagaaagtaaagcaagtt
catcaatctggtggctatggctccaaaggatatggttatgactggaaacgggatgaagca
gagaagaatctgcttcgtactcatacaactgctgtatccacaagaatgttatacaagctt
gctcaggagaaaccttttgctcctaagagatactactccattgatcgagtttttcgaaat
gaagctgttgaccggactcatcttgctgaatttcaccagatagaaggtcttatctgtgat
tatggtttgacgcttggtgatctgattggcgtattggaggatttcttctcaagcctaggc
atgtcaaagctgcgtttcaaacctgcctacaatccatatactgaaccaagcatggaaatt
ttcagttaccatgatggtttgaagaaatgggtcgaagttggtaattcaggcatgtttagg
cctgagatgttgcttcccatgggactgccggacggtgttaatgttattgcatggggtctt
tcacttgaaaggccaacaatgattctttatggcattgacaacataagggacctgtttgga
ccaaaggttgatttcaacctcatcaagagcaacccactatgtcggttgggactgcagtaa
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