Phragmites australis (common reed): 133921271
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Entry
133921271 CDS
T10575
Name
(RefSeq) nuclear-pore anchor-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133921271
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133921271
NCBI-ProteinID:
XP_062222057
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Position
6:5258302..5292228
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AA seq
2049 aa
AA seq
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MPLFMSDEELRLLGGDTAAVAERADAAVRELRRQVDTVRAEADAAAIAAEQTCALLEQRY
ASLSAEFDRSQAEAAELASAAERRAAELASSQAEIHQLRIQAIAKDGEVGRLKVEISELH
KSKSQSLELIEQRDAEIKEKDGIIQSYYDKIVNLADTSCGKEARIQEIEAKLTHSQATCN
RITQEKELLEKHNLWLDEELKTKAKNLAELRKTNMDEEARMSAKIAELEREISGSSSSLR
RSKERVSELEQRVSHMEKELCSTKDAAAANEQRLGAELSTVMKLAELHKESSEEWSKKAG
ELEGVIKALETHLTQVEDEYKEKLEKETLSRRDIEKEAAGLKQKLEKCEFDLENTRKSSE
LSLIPLTSAAADSAYLVDTTMHRLPISDAVNQNDLMIVPKVPSGVSGTALAASLLRDGWN
LAKIYEKYQEATDALRHERWGRRHAEAVLERVMHEIEEKAEFILDERAEHERVVEAYALM
DQKLQQALLEHDNFENTIRNLKSELKRWERDHSVAQTEIDDLQKQVAVLLKECQDIQLRC
GSSLPNVSHGALSASISNGLFDVENNLQDNMAFKDIRGLVEQNVQLRNQIHMLSADLDKK
DMELRDTFQIELKKNIDAAASRVEKVMKKSEEQAIMIESLHRSVAMYRKLCEEQQKTHSN
VESVSKNLQDNGRADVMVLFEGSQEVSKKAYEQVSERARSLDEELAKLRTELVSLRSERD
KAVLEADFARDRLNGFTAELEYQRKEANSVSLRNAELMHLIVDYERRLREDSDSKQTLEE
NSRQLSMEVSILKHEKEILVKSEERALDEVHDLTERVHHLQATIDTIHTMKEVQENARAI
ERRDHEEHIKRLERDWAELRKELQEQRDHVRVLTLDKKNAFDGCMKDVEDMRKELQNSWK
AAFDAESRAAIAESKRSDLEAKLKSRKVMFRDGGGDISATTEEIDELFRLKEELEKYKEE
AQANKNYMVQYKEIARSNEVTLKQLESAHMDYKAESEVCKKSLKDEIAMLRDKLSEMEKS
YVMKCQEASNAIEAKEKHITSLMNDISVLRTEVSQRVSQVENLGIELASSKSALDDQYKR
WRTTQDNYERQVILQSETIQELANTSKHLSSLQQEITMLHQTADEQKAENDALRTFGEQE
KIGLLKEKDEALRKYNELNNQNRILHNQLEALHIRLAEKERSIAGLSSQHTDSHAEDDLH
SVISYLRRSKEIAETEISLIKQEKSRLQIELESALKSAKEAQVLLRSQTDSARTLMFKDE
EFKSLQLQVREINLLRESNIQLREENRHNFEECQKFRDGAQKAKIESERLHNLLLEKQVD
NEICHKELEMHETEIANLNQRVSELVENSKGIDLNTYETMKEELQNIKSTLRENSAELES
ARNLLSEKEIIIRNLEEKLVASQSELDSREKKLNDVEASLKSEMDKIKKVNLSIKRKVEV
LMKEKAEVVKENQSLLKQMEDLKSTGQKTASETTLEQAVKEKDFRIQTLERTLEKERDDN
KKEKENRKRAEKIFATAVQNVRQDKKQVEESMEKHRLAMKEVIEHYPGLSSQIPPVSALE
EHFIAYFRRTKDMEESSFQDGATTQAPVVETATVDAPAAATGRLVDTPPRPAKVKMTEER
AVATLPKQSAELRRPGGRRPLVRPTLEHTEEPQADVDSSAFEGSTVGQDKGGSLLERETS
SGVPVLQPSSRKRLISSSQMIDSTSQGDANDANPPLKKPKEVESSQGTTELKNGQPPVGD
AVAAQVGVLLSTDDQDGQQPTEEMDTDQASVPIEEVEATREDDVGNKDDTGAHVDASMDI
KGRDTDFSIDINAPAVEDTSAKADAVVEPFDEDQKIEDLKEETQLPTATDVEDEMEEGEL
PEEPEQPLDGTALGEAHRGPTPSDAGEQDGNDFRAASPGGLTEKSDVEMLEIGDTTAEPD
RSSIAQLGGTDASPSRTADVSPARERSPNPVQVGVSSEQRSTSTITEGREPSPNPAQASA
SSERNTSNVTEGAETRSRTINLSERAMKNRQARILRSQQPARGRGQQSPAHRKDAAGRGS
RGRGGRGQT
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgttcatgtccgacgaggagctccggctcctcggcggcgacacggccgccgtt
gccgagcgagccgacgcggccgtccgcgagctccggcgccaggtggacaccgtccgcgcc
gaggctgacgccgccgcgatcgcggccgagcagacctgcgccctcctcgagcagcggtac
gcctccctctccgccgagttcgatcgctcccaggccgaggccgccgagctcgcctccgcc
gccgagcgacgcgccgccgagcttgcctcctcccaggcggagatacaccagctacgcatc
caagcgattgccaaggacggtgaggtggggaggttgaaagtggaaatctcagagctgcac
aagtccaagtctcagtcgctggagttgattgagcagagggatgcagagattaaagagaag
gatggaatcatccagagctactacgataagatagtaaatctagctgacacttcttgtggc
aaagaggctcggatacaagagattgaagctaagttaacccatagtcaggcaacatgtaat
cgcattactcaggagaaggagctgctcgaaaagcataatctctggctcgatgaagaactg
aaaacaaaagctaagaacttagctgaattaaggaaaacaaatatggacgaggaggctagg
atgtcagcaaagattgcagagcttgaaagagagatttctggatcttctagttccttaaga
cgaagcaaagaacgggtttctgaactggagcaaagggtatcccatatggaaaaggagttg
tgctcaacaaaggacgctgcagctgctaatgaacaacgtcttggtgctgagctttcaact
gtcatgaaacttgctgaacttcacaaagaaagttctgaggaatggtcaaaaaaggctggg
gaacttgaaggtgttattaaagcattggagacacatttgacccaagtagaagatgaatac
aaggaaaagcttgagaaagagaccttatccaggagagacattgaaaaggaagctgccggc
ttgaagcagaagcttgaaaagtgtgaatttgatctggagaatacaagaaagtccagtgaa
ttgagccttattccattgaccagtgctgcagcagactctgcttatttagtagacacaaca
atgcaccgactgcccatttctgatgctgtgaaccagaatgacctaatgatcgttccaaaa
gtacctagtggtgtttctggaacagcgttagctgcttctcttcttcgtgatggttggaat
cttgctaaaatctatgagaaataccaagaagctactgatgctttacgtcatgagaggtgg
ggaaggagacatgcggaagcagttctggaaagggtcatgcatgaaatcgaagagaaggct
gaatttatcttagacgaacgagctgagcatgagagagtggttgaagcttatgctctaatg
gaccagaaattgcagcaagcattgcttgagcacgataattttgaaaacactatcaggaat
ctaaagtcagagctgaaaaggtgggaacgagatcatagtgttgcacagacggaaatagat
gacctgcagaaacaagttgctgttcttttgaaggaatgtcaagatatacagcttcgttgt
ggttctagccttccaaatgtaagccatggtgctctttctgcgagcataagcaatggtttg
tttgatgttgaaaacaatctccaggataatatggcttttaaggacatcaggggtttagtt
gaacaaaatgttcaacttcgaaatcaaattcacatgctctcggctgatcttgacaaaaag
gacatggaactcagggacaccttccaaatcgagctgaagaaaaatattgatgctgctgca
tccagagttgaaaaagtgatgaagaaatctgaagaacaagcaataatgattgaatctctt
catcgatctgttgcgatgtataggaagttgtgtgaggaacaacagaagactcattcaaat
gttgaatcagtatccaagaatttgcaagataatggcagagcggatgtgatggttctattt
gaaggatcacaggaagtctcgaagaaagcttatgaacaagtttctgagcgagccaggagc
ctcgacgaagaactggctaagttgagaaccgagcttgtgtcgctgcggtctgagcgtgat
aaggcggttcttgaagctgattttgctcgggaccggcttaacggatttacagcggagctt
gaatatcagaggaaggaagctaattctgtttcgctcagaaatgcggagttgatgcatttg
atagttgattacgaacgaagactacgtgaagattcagattctaagcaaactttagaggaa
aactcaaggcagctgtcgatggaggtgtccattttgaagcatgaaaaggagattctagta
aagtcagaggaaagagctttggatgaagtccatgatttgactgagagagtgcatcatctg
caggctacaatcgacacaatacataccatgaaggaggttcaagagaatgcaagggctata
gaaaggagagatcatgaggagcacatcaagcgattagaaagagattgggctgagcttaga
aaggagcttcaagagcaacgggaccacgttcgtgttctgacgcttgataagaaaaatgca
tttgatggctgcatgaaggacgtggaggatatgagaaaggagctacagaactcatggaaa
gctgcttttgatgctgaatcaagggctgccatcgccgagtccaagcgttctgatttggag
gcgaagctcaaatcaagaaaggtcatgtttagggatggtggtggtgacatctctgccaca
actgaggagattgatgagctattccggttgaaagaggagttggaaaaatacaaagaggaa
gcacaagcaaataagaactacatggttcagtacaaagaaattgcacgctcaaatgaagtc
acgctgaagcaattggaatctgcccatatggattacaaggccgagtctgaggtttgcaag
aaatccttgaaagatgaaattgcaatgttgagggataagctgtctgaaatggagaagagc
tatgtaatgaagtgtcaagaagcttccaatgcgattgaagctaaagagaagcatataact
tctctcatgaatgatatttcagttctaagaactgaagtttctcagagagtatcacaggta
gaaaatttaggaattgaattggcttcctcaaagagtgctcttgatgaccagtataagcgt
tggcgcaccactcaagacaattatgaacgacaggttatcctgcaatctgagacaattcaa
gagctggcaaatacttctaagcatctatcttcattgcagcaggaaatcactatgctccat
caaacagcagatgaacaaaaggctgaaaacgatgctctaagaacatttggagagcaagaa
aagataggattattgaaagaaaaagatgaggccctgcggaagtataatgagctaaacaat
cagaatagaattctacacaatcaacttgaagctttgcacattcgattagctgagaaggaa
cggagcattgctgggctttcatcgcaacatactgactcacatgcagaagatgatttacac
agtgtcatcagctacttgcgcagatcgaaagaaatagcagaaacggagatatcattgatt
aaacaggagaagtcaaggcttcagatagaactggaaagtgcattgaagtccgccaaggag
gcgcaggtcttgctgcgcagtcagactgatagtgcaagaaccttaatgttcaaggatgaa
gaattcaagtcactgcagctccaggtgagagaaattaatttgcttcgtgaaagcaatata
cagcttagagaggagaataggcacaattttgaagaatgccagaagttccgcgatggagct
caaaaggctaaaattgagtctgaaaggttgcataatcttttactggagaagcaggtagat
aatgaaatatgccataaagaactagaaatgcacgagacggaaatagcaaatctcaaccaa
agggtttctgagttggttgaaaatagtaaaggcattgatttgaacacatatgagaccatg
aaggaagagcttcaaaatatcaaatcaaccttgagagagaattcagctgagcttgaaagt
gcaagaaatcttctttctgagaaagaaattatcataagaaatttggaggagaagcttgtt
gcaagccagtctgaattggattccagggaaaagaagctgaatgatgtagaggcttccctg
aaatctgaaatggacaagataaagaaggttaatttatccattaagaggaaggttgaggtc
ttgatgaaggagaaggcggaggttgtcaaagaaaatcaaagccttttgaagcagatggaa
gatcttaaatcaacaggtcagaagacagcatcggaaactacacttgaacaagctgtaaaa
gaaaaggatttcagaatacagacattggaaagaacattggagaaggagagagacgataat
aagaaagaaaaagaaaaccgcaaaagggctgagaagatatttgcaacagccgttcaaaat
gtgagacaggacaagaaacaggtagaagaatctatggagaagcataggctggctatgaaa
gaggttattgagcattatcctggactatcatctcaaataccacctgtgtctgcactggaa
gagcattttattgcatacttccgcagaactaaagatatggaggagtcttccttccaagat
ggtgccacgactcaggcccctgttgttgaaactgccactgtggatgcacctgcagctgct
acagggcgactggtagacactccaccaaggcctgctaaagttaaaatgacagaagagaga
gcagttgctactttgcccaaacaaagtgctgaattacgtagaccaggaggaagaaggccc
cttgttcgacctactcttgagcatactgaagaaccacaagctgatgtggattcatcagct
tttgagggttccacagttggtcaggacaaaggtggctcgttgctagagcgtgaaacttcc
agtggtgtacccgtgttacagccctcaagtcgtaaacgtcttatttcatcgtcacagatg
atagacagtacttcacaaggtgatgctaatgatgctaatcctccattaaagaagcccaag
gaagtagaatcttcacaggggactactgagctcaaaaatggacaaccacctgttggggat
gctgtagcagcacaggttggtgtgcttctgtcaactgacgaccaagatggtcaacaaccc
acagaagagatggacactgatcaggcttctgtgccaatcgaagaggttgaggcaacaagg
gaggatgatgtgggtaataaagatgacacgggagctcatgtggatgcatcaatggacatc
aaaggccgggatactgattttagtattgacatcaatgcacctgctgtagaggatacgtcg
gccaaggcagatgcagtagtggaaccatttgatgaagaccagaaaattgaagatttgaag
gaagagactcagcttcctactgcaaccgatgttgaagatgagatggaagagggagagttg
ccggaggaacctgaacaacctctagacggtactgcactgggagaagctcataggggacct
actccttcggatgctggtgagcaagatggtaacgatttcagagcggcatctccaggagga
ctaacagaaaagagtgatgttgaaatgttagagataggtgatactactgccgaaccagac
cgaagctcgatagcacaattaggaggaacagatgcctcaccaagcagaaccgcagatgta
tccccggcacgtgaacgttcccctaatccagtccaagttggtgtatcttctgaacagcgg
agtacaagtactataacagagggacgtgaaccttctcctaatccagcccaagccagtgca
tcttctgaacggaataccagtaatgtaacagagggtgccgaaactcgttccagaactatc
aacttaagtgagagagccatgaaaaataggcaagccaggattcttcgctctcaacagcct
gccaggggtcgtggccaacaatctcctgcccataggaaagatgctgctggccgaggatca
cgggggcgtggcgggcgtggtcagacctag
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integrated database retrieval system
