Phragmites australis (common reed): 133921287
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Entry
133921287 CDS
T10575
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133921287
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133921287
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
Helicases
133921287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
DEAD
WHD_HA2
HA2_C
AAA_22
nSTAND3
ATPase
AAA_19
TNP-like_GBD
PhoH
Motif
Other DBs
NCBI-GeneID:
133921287
NCBI-ProteinID:
XP_062222082
LinkDB
All DBs
Position
6:complement(5560332..5566319)
Genome browser
AA seq
1357 aa
AA seq
DB search
MAPSPPSVASSSSRLPTRHGRRPLKRSKALGGAGEKLRRHRAPQPRCRLPSQQQHTSASP
PPPTQTPRTPAGTVTRSSMEDSNALILPCKRKNKAQGKAKDGKKDKKKEDPKMSKNKLKM
LQKLEEEKKKKLLQAECIEILQKHKISDDAYSLLHASGTIGQAETLKEKRRRAVQFSKAG
LDVPGELSLFKKNGDRKISENSDTWEQDCPAKFVEFEPAKSENPGREHKNNNNMKNGSVK
AVEHQLMMDVGVSIPESIAEEPSDDAHMLENQKIQSSSPSCSGAELDLQDKEPGQGEATV
QECINPPIVVPVSRPHEVEKARRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQ
FLYEAGFGTSDRADRKGIIGITQPRRVAVLATARRVSYELGLKLGREVGFQVRHDKMIGS
KCSIKFMTDGILLRELQSDFPLRRYSVIILDEAHERSLNTDILIGMLSRIIKIRKTLYSE
QQEKIRSGLNIKPEHMISQLKVVLMSATLQLKDFISNRRLFHVIPPAVKVPVRQFPVTVH
FSKRTHDDYLGQAYKKVMSIHKRLPPGGILVFVTGQREVDYLCKKLRRPSKAQTAKMPEK
VDGDEIGPCPEVDEKEIFEAYDIDRSKSEHQDDMFSSYDQDDMNAGPNVDSSDNETESEM
DTDSDDEESVAYETTEEDSPVLAFLKDAESSSALKASFGALSGISGAQESVEKLSDTTSE
QKFSPSVRSFSKRTEHMSVSHGRLRVLPLYAMLPASQQLQVFQDIPEGERLVVVATNVAE
TSLTIPGIKYVVDTGKEKVKNYDHATGMSSYEVQWISKASASQRAGRAGRTGPGHCYRLY
SAGAYGKDDLFPEFAEPEIKKIPVEGIVLMLKFMAIDKVVNFPFPTPPNQESLVEAERCL
RTLEALDSLGRLTPMGKAMAQYPMSPRHSRLLLTVIKILKSQRGVVRSNFILGYATATAS
ALSFTNPFLKQLEECDTNGESKEHNTDPEIYDPQERKRQKKLKVMVREAQEIFSNPSSDA
LTVARALQLFELSENPVEFCRVNSLHLKTMEEMSKLRKQLLRLIFHHGKVCEEFAWNFGD
SEDVEQAWRSESSKRPLQMNEEELLGQGICAGWADRVAKRNHTYSRSSEDDRKVQAVRYQ
SCTLNDTIYLHRSSSVAQIAPELVVYAELLNTKRSYMHGVTTVKPGWLLKYASSLCTFSA
PLEDPKPYYDPFNDQVYCYVSPLFSRHNWQLPLHSLPIKDHTRRRQVFAYALLKGDVLPC
LRDVEKYLALSPSVVLGPASQTRVGDLLSRMKKKLIDSRAALRDAWNADPDFLCPEIKVW
FQDKFHSRFGETWEKMHQEVLLEGRELFPKRSKRVKG
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcgccaccgtccgttgcctcctcctcgtcccggcttccgactcgccacggc
cgccgtccacttaaaaggagcaaagctctcggcggcgccggcgaaaagcttcggcgtcat
cgcgctccccagccgcggtgccgccttccttcccagcagcagcacacttctgcctccccc
cccccccccacacagaccccgcggacgccggcgggcacagtaacgagatcaagcatggaa
gatagcaacgctctgattttgccctgcaagaggaagaacaaagcgcaggggaaagccaag
gatggtaagaaagacaagaaaaaggaggacccgaagatgagcaagaataagctaaaaatg
ctgcagaaattggaggaagaaaagaaaaagaagctgctgcaagctgaatgcatcgagatt
ttgcagaaacacaagatctcagatgatgcatattcattgctgcatgcttcagggactatc
ggtcaagccgagactttgaaagaaaaacgtaggcgtgctgtgcagttctccaaggctggt
ttggatgttcctggagaactctcgctattcaagaaaaatggtgatcgaaaaatttctgaa
aacagcgacacttgggagcaagattgcccagccaagtttgttgagtttgagcctgcaaaa
agtgagaatcctggtagagaacataagaataacaataacatgaagaacggttcagtgaaa
gctgtggaacaccaactaatgatggatgttggagtaagcattccagagtcaatagctgaa
gaacctagtgatgatgctcatatgttggaaaatcagaaaattcagtcgtcaagtccaagt
tgctcgggagcagagctagatttgcaggataaagaaccaggacaaggggaagctactgta
caggagtgcataaatcctccaattgttgtgcctgtgtcaagaccacatgaggttgagaag
gcaaggagggatctcccaataataatgatggagcaggaaataatggaagctatctatgaa
aattctgtagtaattctgtgtggagaaacaggctgtggtaaaactactcaggttcctcag
ttcctatatgaagctggctttggcacaagtgatcgtgctgatagaaaagggataattggt
atcacccaaccacgacgtgttgctgttcttgccacagctaggagggtgtcctatgagtta
ggacttaagctgggaagagaagttggttttcaagttaggcatgataaaatgataggaagt
aaatgctccatcaagttcatgacagatggtattttgctgcgagagctccagagtgacttt
ccattgaggcgctattcagtgatcatcttggatgaggcacatgaaaggagcttgaacaca
gacatacttatcgggatgctatccagaatcataaagattcgcaagactttgtattcagag
cagcaggaaaaaatacggtctgggttgaacatcaaaccagagcatatgattagtcagttg
aaagtggtgctcatgagtgctactctgcagttgaaggactttatttcaaacagaagattg
tttcatgtgatcccaccagctgttaaggtacctgtccggcaatttccggtaacagttcac
ttctcaaagaggacacatgatgattatttaggacaagcttataaaaaggttatgtcaatc
cacaagaggcttccaccaggtggaatccttgtctttgtcactggacaacgggaagtggat
tacttatgtaagaaattgcgaagaccatccaaggcgcaaactgctaagatgcctgaaaaa
gttgatggtgatgaaattggtccatgcccagaggtagacgagaaagaaatttttgaagcg
tatgatattgataggagtaaatctgagcaccaagatgatatgttttcatcatacgatcaa
gatgatatgaatgctgggccaaatgtcgattcttctgacaatgaaacggagagcgagatg
gatactgacagtgacgatgaagagtctgttgcttatgaaaccacagaagaggattctccc
gtattagcatttttgaaagatgctgagagctcatctgcgctgaaggcgtcatttggagct
ctatcaggaatatcaggagctcaggaaagtgttgagaaattgagtgatactacaagtgaa
caaaagttcagtccttctgttcgttctttcagtaaacgtacagaacatatgtctgtttcg
catggtagacttcgtgtcttgccactttatgcaatgttaccagcttcacagcagcttcaa
gtgtttcaggatatccctgagggggaaagattagttgtggtggcaactaatgttgcagaa
acctctttaacaatccctggcataaaatatgtagtcgatactgggaaagaaaaggttaag
aattacgaccatgctactgggatgtcaagttacgaagtccagtggataagcaaggcatca
gcatcccagcgtgctgggagagctggaagaactgggcctgggcactgttaccgtctctac
tcagctggagcatatggtaaagatgatttatttcctgaattcgctgaacctgagataaag
aaaattccagtcgaaggcattgtgctaatgctcaagtttatggctattgataaggttgtg
aactttcctttcccgacgcctcctaaccaggaaagtttggttgaagctgagcgttgctta
aggacactagaagcacttgatagcctgggcagacttacaccaatgggaaaggctatggcg
caataccccatgagcccacgacattcccgtcttcttctgacagtgattaagattctgaag
agccagcgaggcgttgttagatctaacttcatattgggatacgccaccgccactgcatca
gcattgagttttactaatccttttctcaagcagttggaagaatgtgatactaatggtgaa
tcaaaagaacataacactgatccggaaatttatgatccacaggaaaggaagagacaaaag
aagctcaaggtcatggttagagaggcgcaggaaattttttccaacccgagtagtgatgct
ttaactgtcgctcgtgccttgcagttatttgagttgtcagaaaacccagtggaattctgc
agagtcaattcacttcatctcaaaacaatggaagagatgtcaaaattgagaaagcaactt
ctccggttaatatttcaccatggcaaagtttgtgaggaatttgcttggaattttggagat
tctgaggatgttgaacaggcctggaggagtgagtccagtaaaagaccattgcaaatgaat
gaagaggaacttctagggcaaggaatttgtgctgggtgggctgatagggttgcaaagagg
aatcacacctattcaaggtcatcagaagatgatcgaaaggttcaagctgttcgttatcaa
tcttgcacgcttaatgatacgatatatctccaccgatcatcttctgttgctcagattgcc
ccagaacttgtagtttacgcagagctactaaatacaaagaggtcatacatgcatggtgta
accactgtaaagccagggtggcttttaaagtatgctagttctctctgcaccttctctgcg
ccgttggaagatccgaaaccctattatgacccctttaatgaccaagtctactgctatgtt
agtccactcttttctcggcataattggcagcttcccttgcatagtctacctatcaaagac
cacaccaggcggcggcaggtatttgcatacgctttgcttaaaggggatgtcttgccatgt
ctaagggatgttgagaagtacctggcactgtcaccatctgttgtcctggggcctgccagc
caaacaagagttggagatcttcttagcaggatgaagaaaaagttaatcgacagccgggca
gcactaagagatgcatggaatgctgatccagattttctctgtcctgagatcaaggtgtgg
ttccaggataaattccatagccggtttggcgaaacatgggagaagatgcaccaagaggtt
cttctcgaggggcgtgagctttttccaaagaggtccaagagagttaaaggttag
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integrated database retrieval system
