Phragmites australis (common reed): 133921317
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Entry
133921317 CDS
T10575
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00450
Selenocompound metabolism
paua00970
Aminoacyl-tRNA biosynthesis
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
133921317
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133921317
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133921317
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133921317
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
133921317
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class I (U)
133921317
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133921317
Prokaryotic type
Other AARSs
133921317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
Hormone_recep
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
133921317
NCBI-ProteinID:
XP_062222116
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All DBs
Position
6:5982403..5988577
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AA seq
800 aa
AA seq
DB search
MASSSPPKLPVPGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYIC
GTDEYGTATETKAMEEKCSPKEICDKYHAIHNEVYKWFNIKFDKFGRTSSPHQTEICQAI
FHKLMENNWLTENTMQQLYCDTCQRFLADRLVEGACPTEGCNYEAARGDQCEKCSKLLNP
TELIDPKCKVCKNTPRIRDTDHLFLELPLLRDKLVNYINETSVAGMWSQNAIQATNAWLK
EGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITASYTPEWEKWWKNPDNVE
LFQFMGKDNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDA
KDTNIPPEVWRYYLLMNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFIAKPSGA
GYDSIIPDAPNAESHPLTKAFAEKTSKWVEQYLDAMEKVKLKQGLKIAMGISSDGNAYLQ
ESQFWKLYKEDPGTCAIVMKTSVGLVYLLACLLEPFMPSFSNEVLRQLNLSHEENLSFNE
DKGESARAKTPWDFVPAGHTIGKPSPLFKELEDEEVDHLREKYAGSQAERGLKAIADAEA
TEAANQLKGTKLSDGGPKKEQKKQSGSSKSKTGEAEVSVAKLDIRVGLIRKAEKHPDADS
LYVEEIDVGEEAPITVVSGLVRYIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASNE
DHTKVELVEPPAAAAVGERVTFAGHSGEPEASLSGKSKVWEKLAADLHSNGELVACYKNV
PFATSAGVCKVKTIADGEIR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttcgccgccgaagctgccggtccccggccgccgcaacatactcatcacc
agcgcgctgccctacgtcaacaacgtcccccacctggggaacatcatcggctgtgtactc
agcgccgacgtgttcgcgcgctactgccggctgcgcgggtacaacgtgatctacatatgc
gggaccgacgagtacgggacggccaccgagaccaaggccatggaggagaagtgctcgccc
aaggaaatctgcgacaagtaccatgctatccataatgaagtttacaagtggtttaacata
aaatttgataagttcgggcggacgtcctctcctcatcagacagaaatatgccaagcaatt
ttccataaattgatggaaaacaactggctcacagaaaataccatgcagcagctgtactgt
gatacgtgtcaaagatttttggccgacaggctcgtggaaggagcatgcccaacagaaggc
tgtaattatgaagcagcgcgaggagatcagtgtgaaaagtgtagcaaattgttgaatcca
actgaactaattgatccaaagtgtaaggtttgtaagaatactccacgtattcgtgacaca
gatcacttgttcttggagcttcccctattgagagacaagttggtaaactatataaatgaa
acttctgtagcgggtatgtggagtcaaaatgccattcaagcaacaaatgcatggttgaag
gaaggactaaagccccgatgtattaccagagatcttaaatggggagttcctgttccacat
gagaagtttaaagacaaggtgttctatgtttggtttgatgctccgattggttacatatct
atcacggcatcctatacacctgaatgggagaaatggtggaagaatcctgataatgtagag
ttgttccagttcatgggcaaagataatgtgccatttcacacagtcatgttcccttcaaca
ctacttgggactggcgaaaattggacaatgatgaagaccataagtgttactgaatattta
aattatgaagcaggaaaattctccaagagtcatggtatcggagtctttggtaatgacgca
aaggatacaaatattcctcctgaagtatggcgatactacctgcttatgaatcgccctgag
gtatcagatacactctttacttgggccgatttgcaagccaagttgaacagcgagttgctg
aacaacttgggaaacttcatcaatcgtgtgctaagctttattgcgaaaccatctggagct
ggatatgattcaatcatacctgatgctcctaacgctgagtcacatccattgacaaaagcg
tttgcagaaaaaactagtaaatgggtcgaacaatatcttgatgcaatggaaaaggtcaaa
ctgaaacaaggactgaagattgcaatgggcatctctagcgatggaaatgcgtatctgcaa
gagagccaattttggaaactttacaaggaagatccaggaacatgtgcgattgtgatgaaa
acttcagttggtcttgtctacctccttgcctgtctgctcgaacctttcatgccttccttt
tctaatgaagtgttacggcaattaaatttgtcccatgaagaaaatttgtcattcaatgaa
gataaaggagaaagcgcaagggcaaaaactccttgggattttgtaccagcagggcacaca
ataggaaagccttcacctctatttaaggaattggaagatgaagaagtggatcaccttagg
gaaaaatatgcaggcagtcaagctgagaggggcttgaaagcgatagctgatgctgaagcc
accgaagctgctaaccagctcaagggcacaaagttgtctgatggaggtccgaaaaaggaa
cagaagaagcaatctggtagttcaaaatcaaagacgggagaggcagaagtttctgttgca
aagttggatatccgggtagggcttatcagaaaagctgagaagcatccagatgctgattcc
ctttacgtagaggagattgatgttggagaggaggcaccaataacagtggttagcggcctt
gtcagatacattcctcttgaagaaatgcagaaccggaaagtgtgcgttctctgcaatctg
aaaccagtggcaatgcgcggtataaaatcacatgcaatggttttggctgcatcaaatgag
gaccataccaaggttgagttggttgagccaccggcggcagctgccgtgggggagagggtc
acctttgctgggcactcgggagagcctgaggcttctcttagtggcaagagcaaggtgtgg
gagaagctagctgctgacctgcacagtaacggagagcttgtggcgtgctacaaaaacgtc
ccgttcgccacttcggctggtgtatgcaaggtcaagactatagcagatggagaaattcgc
tag
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