Phragmites australis (common reed): 133921344
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Entry
133921344 CDS
T10575
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133921344
mRNA degradation factors
5'-3' decay
Decapping complex
133921344
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133921344
NCBI-ProteinID:
XP_062222153
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Position
6:6298786..6306728
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AA seq
1313 aa
AA seq
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MASPTGNPNPNPPFELGKLFRPPPNPMSTATAAPIFSGGAGGPAGPPPPPGPYSYPPVTP
PFHRGPYLHYPQDPHAMPRPVVSFPMPNPNPNPNPNANPNAAAPGPNPGARLMQLLGNSG
PTQLETTVSMSPPTSEFAQPPPLPAMPSAPPARMLSSTTSKVPRGRLLGGGDRAVHDVDS
RLPGEVQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSLL
RGHTQRVTDMAFFAEDVHRLASASVDGRIYVWRIDEGPDKENKPQISGKIEIAIQVVGDS
EAYHPRICWHSHKQEILFVGIGNCVLRIDTTKVGKGRDFTVEEPVKCHLEKLIDGVRLVG
KHDGDVTDLSISQWMSTRLASGSKDGTIKIWDDRKPVPLSILKPHDGQAVYLVAFLTAPE
RPNHINLVTAGPLNREIKIWASTNEDGWLLPSDSETWNCTQTLELVSSLEPRVEEAFFNQ
VAVLPQASLILLANAKKNAIYAVHVEYGPDPASTRLDYIADFTVAMPILSLTGTHESQHD
GEQVVQVYCVQTMAIQQYGLELSLCSPPTADTTGFGRDPAISRAYETPLEVVGTESSTGT
SFTDSYSVGAHSKLSTVDQSAEFDPKPSAPPLTYSEGDGSMHLPSAPLTSKMELAGSGPS
PGNRDIDQSAYEYTANRNMERDALKRQDTPMPMRKDEPRDSHSDVAMLPNARLMFQVGGN
ATHLVTPSEIISGTLSSSENNDVSKSDGGKIQDVSGSSSRIAEVEPKHIDESKPDQNSEL
EAIKETQSSLEQTVEMISERSVTADKYSVEESQSPSDRPASEQTVAADENVLKKFVEMPE
KSDHSSASREQSSLLPQTSGQSSPASAFNSTESHEPLSCAYPPIDSFPEGAATQGMLQQL
IVTHKDMEKQLGTMISAHIAKEGKRLETSLGRTMEKSVKVNIDALWARLQEENTKREKAE
RERMQQLVTLITSSINKDFPAMLEKLLKKEISSLGPVVARAITPIIEKCLVSAVSDSVQK
GVGDKVCNQLDKSVSGKLEATLARQIQVQFHTSVKQVLQDALRTSFESLLVPAFEQSCKT
MFEQVDGAFQKGMSEHTVAIQQQVEAAHTPLALTLKETINSASSITQSFSSELLDGHRKL
LALVASGNAKAHNTNALQPINGPMGGPPEVEAPLDPMKELGRLISERKFDEAFTMALQRS
DVSIVSWLCSQVDLRALCAMVPVPLNQGVLLALLQQLAVDLSNETSRKVQWMTDVAMAIN
PTDQMIAVHVRPIFEQVYNQLVLQRSLPTTNPSDGTSIRVIMHVINSVQLSYK
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccgaccggaaaccctaaccccaacccacccttcgagctcggaaagctcttc
aggccacccccgaaccccatgtccacagccaccgccgctcccatcttctccggcggcgcc
ggaggccccgctggcccgcctccgccgcccggtccctactcctatcctccggtgactccg
cccttccaccgcggaccctacctccactacccgcaggacccccacgccatgccccgcccc
gtcgtctccttccccatgccaaacccaaaccccaaccccaaccccaacgcgaaccccaac
gccgcagccccgggccccaaccccggtgcgcgcctcatgcagctgctcggcaactcgggt
ccgacccaactcgagaccaccgtctccatgtccccgccgacgtcggagttcgcacagccg
ccgccgctccccgcgatgccgtccgctcctccggcaaggatgctgagcagcaccaccagc
aaggtgcccagggggcggctgctgggcggcggggaccgagcggtgcacgatgttgactcg
aggttgcccggggaggtgcagccgccgcagctggaggtgacaccgatcaccaagtacacg
tcggatccggggctcgtgctgggcaggcagatcgcggtgaaccggacgtacatcgtgtat
gggctcaagctcgggaacatccgtgtgctgaacatcaacaccgcgcttcgctcactcctc
cggggtcacacacagagggtgacagacatggctttctttgctgaggatgtccatcgtttg
gcaagcgctagtgtagatgggcggatatatgtgtggaggattgatgagggacctgataag
gaaaataaaccacaaatttctggaaagattgaaatcgccatccaggttgtaggcgattct
gaagcttaccatccaaggatctgttggcactctcataagcaagaaattctgtttgttgga
attggaaactgtgtcttaagaatagacacaactaaagtgggaaagggaagagactttact
gtggaagaacctgttaaatgtcatcttgaaaagcttattgatggtgtgcgcttagttggt
aagcatgatggcgatgtgacagatctgtccatatctcaatggatgagtacgcgcctggcc
tcaggatcaaaggatggcacgataaagatctgggatgatcgcaaaccagtgcctctatcc
attctaaagccacatgatggtcaagctgtttacttggttgcttttcttacggcacctgag
cgcccaaatcatattaacctcgttacagcaggtcctctgaaccgagaaattaaaatttgg
gcttctactaacgaagatggttggttattaccaagtgattctgagacttggaattgtact
cagaccttggaacttgttagttctttggaacctagagttgaggaggcatttttcaaccag
gtcgcagtgctgcctcaagcaagcctgattttgcttgcaaatgctaaaaagaatgctatt
tacgccgtgcatgttgaatatggcccagatcctgcctctactcgcttggactatatagcc
gatttcacagttgcaatgcctattttaagcctcaccggaacacatgaaagccaacatgat
ggtgaacaagttgttcaagtctactgtgtccaaacaatggccattcagcagtatggactg
gagttatcactctgttcgcctcctacagctgatactactgggtttggaagagatccggct
atttcccgtgcttatgagacacctctggaagtggtaggaacagagtcatctacaggaact
agtttcaccgactcttattctgtcggtgctcatagtaaactatcaactgttgaccagtct
gcagagtttgatccgaaaccatcagctccaccgcttacatattcagaaggtgatggttcc
atgcatcttccatctgcacctcttacatcaaagatggagcttgctggatcaggaccatca
cctggcaaccgtgatatagaccaatcagcttatgaatacacggcaaacagaaacatggag
cgtgatgctttgaaaaggcaagatacacccatgcccatgagaaaggatgagccaagagac
agtcacagcgatgttgcaatgcttccaaatgcccgtttgatgtttcaggttggagggaat
gctacacacttggtaactccatctgaaattatatcgggcactctctcttcttctgagaac
aatgatgtctctaaatctgatggtggaaaaattcaagatgtttctggtagcagctctcgg
attgcagaagtggaaccaaaacatattgatgagagtaaaccagatcaaaattcagaactt
gaagctataaaggaaactcagagttcattggagcaaactgttgaaatgatcagtgagcgc
tctgtgacagctgataagtacagcgtggaagaatcacagtcaccatctgatagaccggcg
tctgagcaaactgttgctgctgatgaaaatgtcctgaaaaagtttgtggaaatgcccgag
aaaagtgatcattcctctgcttccagggagcaatcatctttgcttcctcagacatctggt
cagtcatctcctgcgagtgctttcaactcaacggagtcacatgagcctttgagctgtgca
tatcctcctattgactcctttccagaaggtgctgccacacaagggatgctgcaacagctt
atagtgacgcacaaggacatggagaagcagttgggtactatgatttctgcccatattgcg
aaggaaggcaaaagactcgagacatcattggggcgtaccatggagaaatctgtcaaggtt
aacattgatgccttgtgggctcgtctccaggaggaaaacactaaacgtgaaaaggctgaa
agagagcgaatgcaacaattggttactctcatcacgagctcgataaacaaggactttcct
gctatgctggagaagttacttaagaaagaaatctcttcacttgggcctgttgttgcacgg
gcaataacacctattattgagaaatgcttagtttctgccgtttctgattcagttcagaaa
ggggtgggtgacaaggtgtgcaatcagctggacaagtctgttagtggaaaacttgaagct
acacttgctaggcaaatccaagtgcagtttcatacatctgtaaaacaggttcttcaggat
gctttacgcactagctttgaatcattgcttgttccagcgtttgaacaatcttgcaagaca
atgtttgagcaagtagatggtgcatttcagaaaggaatgtctgagcacaccgttgctatt
cagcagcaagttgaggcagcacatactccattagcgttaactttaaaggaaaccatcaat
tctgcatcatcaattacccagagtttttcatcggagttacttgatggccatcgcaagcta
ttggcactggttgcttctgggaatgctaaggcacataatacaaatgctttgcagcccatc
aatggtcctatgggcggtcccccagaggtcgaggctccattagatccgatgaaagagctg
ggtagactgatatctgaacgcaaatttgatgaggcatttacaatggctcttcaaagaagt
gacgtttccatagtgtcgtggctgtgctctcaggttgatttgcgtgcattatgtgcaatg
gtccctgtccctcttaaccagggggtccttctggccctattgcagcagctagcagttgac
cttagcaacgagacatcacggaaggttcaatggatgacagatgttgccatggcaatcaat
ccgacagaccagatgatcgccgtgcacgtgcgacccatctttgagcaagtctacaaccaa
ttggtcctccaacggtcactccccaccacgaatccatcagatggcaccagtatccgcgtg
atcatgcatgtaattaactcggttcagcttagctacaagtga
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