Phragmites australis (common reed): 133921381
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Entry
133921381 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133921381
KO
K20308
trafficking protein particle complex subunit 11
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133921381
Membrane trafficking [BR:
paua04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
133921381
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
TPR_12
Gryzun
TRAPPC13_C
MIT
Motif
Other DBs
NCBI-GeneID:
133921381
NCBI-ProteinID:
XP_062222206
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Position
6:complement(6736398..6742484)
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AA seq
1177 aa
AA seq
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MEDYPEELRTPPLSLVSIVGCPELHPSISAALSSQQPPMNTLALPDFAKASILAHSGKTR
DPLAPPPPPAGILKKDWLLKHRTRVPAAVAALFRADQVSGDPAQWLQACSDLENLKSVIQ
GKNTKLVVVLLQAQAGDELSEDVIVALRKRAEIDSKHLVVLVEHDEIERNKSLNKLKNVF
AELCSAFYKEEGRRIKARIEKRNFASVELSIRYCFKVAVYAEFRRDWPEALKFYEEGIRV
LREMIGTSTRLPPTQRLVEIKAVAEHFHFKISTLLLHAGKVVEAITWFRKHIRSYERVVG
TPEVAFLHWEWFSRQFLVFGELIETTSATVPDTLSPRFGTADNALTEWEFQPAYYYQLAA
TYLREKRYAIECSSSMANLTTEVNGIPESVMSSVYVGQYVRLFEQGDTVSVVPLSDTEYT
SYALSEAERFQDSYEIIALFRKAYESFQSLGATRMASACSGGMAIEYYAAGDFSNAKQLF
DGVAGLYRQEGWTTLLWENLGYLRECSRKLIYLKDFISYSLEMAALPLFSASREEHRENK
IKIGPAGTPTISRRENIQREVTNVLERKQSLEGIGDGFNNVMEEFTHLDIDQISPLRMVL
TASVAFHDQSVKPGSPLLVSVSLLSHLPSPVVIDQLEVQFNQSDCNFVIRSTQEDSPPLN
SNLNDQVVQATSLTLLTNKWIRLTHEVKSGQSGKLECLSVKATINKHLVICCQAESPASL
EEFPLWKFEDQVETLPTKDNVLAISGQKLIQVEEPDAQVDLILNSAGPALIGELFIVPVT
ILSKGHAVHCGELKINLVDARGGGLLMSPREAEESESHHVELLGVSTVAEDKESKEEVDS
IRKIQYSFGVVSVPTLSVGDSWSCKLEIKWHRAKSVMLYVSLGYSLGSSEEAALHRLNVH
RSLQIEGQIPMIVSHQFLRPFRREPLLLSGIRSSSGDDKKCSLAMNESNMLILNARNCTE
VPLRLHSMTIEPDDDGKQLCSVQQISGISSGHAVIAPSAEYKGIFSVNPRASNSNFNLGE
ICLNWSRDSSLGEGQESRVVMKQRLPEVNIEEPPLVVSMECPPYAILGIPFTFYVKIHNS
TSLLQEMKYSLVDSQNFVFSGAHNHAASILPKSEHIISHKLVPLSSGFQQLPRITVTLVR
YSAALTPSTSAATVFVYPSEPKFNLERSCSTSDECVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaggactacccggaggagctgcggacgccgccgctatccctcgtgtccattgtgggg
tgcccggagctgcacccctcgatctcggcggcgctcagctcccagcagccgcccatgaac
accctggcgctcccggacttcgccaaggcctccatcctcgcccacagcggtaagacccgc
gacccgctcgccccgccgccgccccccgcggggatcctcaagaaggactggctccttaag
caccgcacccgcgtcccggccgccgtggccgcgctgttccgggccgatcaggtctccggc
gatcctgcccagtggctccaggcctgctccgatctcgagaacctcaagtctgtaattcag
ggaaagaacactaaattagtggtggtccttttacaggctcaagctggtgatgagctgagc
gaggacgtcatagttgccctgagaaaacgcgcggaaattgattctaagcacctggttgtg
ttggttgagcacgacgaaatagaacggaacaaatctctcaacaaattgaagaatgttttt
gcggagttgtgttcagcattctataaagaggaagggcgaaggataaaggctcgcattgag
aagaggaactttgcttctgttgagctgagcatccgctactgctttaaggttgctgtttat
gcggagtttagaagggattggccagaagcattaaagttctatgaggaaggcattcgtgtt
ttgcgtgagatgattggaacttcaacaaggttgcctccaacccaacgcctagttgagata
aaagcagttgctgagcactttcactttaagatatcaactttgctacttcatgccgggaaa
gtagttgaagcaatcacatggttccgcaagcatatccgaagctatgaacgggttgtcgga
acaccagaagttgcctttcttcactgggaatggtttagcaggcagttccttgtgttcggt
gagcttatagaaacaacatctgcaactgttccagatacactatctcctcgatttggtact
gctgacaatgcattgactgagtgggaatttcagccagcttactactatcagttagcggca
acttacttgagagagaagaggtatgccatagaatgctcttcgtcaatggcaaaccttacc
acagaagtaaacggaatacctgagtcagtaatgtcttctgtatatgttggccaatatgtg
cgcttgtttgagcaaggggatacagttagtgtggtacccctttcggatactgaatacaca
agctacgctttgtcagaagctgagaggtttcaagattcttatgagataattgcgttgttc
agaaaagcttatgaatcatttcagagcctaggtgctacaagaatggcttctgcttgtagt
ggtggaatggccatagaatattatgcagctggggattttagcaatgcaaaacaacttttt
gatggtgttgctggtctatatcgccaagagggttggaccactttactttgggaaaaccta
gggtacttgagagagtgctcaaggaaacttatttatctgaaggattttatcagttattcc
ctagagatggctgcattaccattattttctgctagtcgagaggaacatcgagaaaataaa
attaagattgggcctgcaggtactcctaccatttccaggagagagaatatacagcgggaa
gttactaatgttttggaaagaaaacagtcactagaaggaattggtgatggatttaataat
gtgatggaagaatttactcaccttgatattgatcaaataagtccgctaagaatggtgctt
accgcatctgttgcttttcatgatcaatctgtaaaacctggttcacctctgcttgtcagt
gtgtcactgttatctcatcttccttctccagttgtgattgatcagttggaggttcaattc
aatcaatctgactgtaactttgtgatacgtagcacacaggaagattctcctcctttgaat
tcaaatttgaatgaccaagttgttcaagctacttctcttacactactcaccaataaatgg
attcggttgacacatgaagttaaatcaggacagagtggaaagctagaatgtttgtcggtg
aaggcgacaataaacaaacaccttgtgatttgctgccaagctgaaagtcctgcttccttg
gaagaattcccattatggaaatttgaggaccaagtggagacactgcctacaaaggacaat
gttcttgccatttccgggcagaaactgatccaagttgaagagccagatgctcaagttgac
cttatcttaaattctgctggtcctgcattaattggagagttatttatcgtacctgtgacc
atattgtcaaaagggcatgcagttcattgtggtgagctgaaaattaaccttgttgatgcc
agaggtggtggtctgttgatgagtcctagggaagcagaagagtctgaaagtcatcatgtc
gaacttcttggtgtctcaactgtggccgaggacaaagagtcaaaggaagaggttgatagc
ataagaaagattcagtactcatttggggttgtatctgttcccacattgagtgtgggtgat
tcctggtcgtgcaaattggaaatcaaatggcatcgagcaaagtcagtcatgctctatgtt
tcacttggctactccctaggctcaagtgaagaagcagcactgcacaggcttaacgtgcat
agaagcttgcaaattgaagggcagatccccatgatagttagtcaccagtttttgagacca
tttaggcgagaacccttgttgctatccggcataagatcctcaagtggcgatgacaaaaaa
tgttctcttgctatgaatgagtctaatatgcttattttgaatgctagaaattgcactgag
gtgcctttgcgtttgcactctatgaccatcgaacctgatgatgatggaaagcagctctgc
tcagtgcaacagattagcggaatttccagtggacatgcagttattgctcctagcgcagaa
tacaaaggaatattttcagtcaatccacgggctagcaattcaaacttcaacctaggtgaa
atttgcctgaactggtcaagagattcaagccttggagagggtcaagagagccgtgtagtt
atgaagcaaaggttacctgaggtcaatattgaggagccgccgcttgtcgtgagcatggag
tgccctccctatgctatccttggaatccctttcactttctatgtgaagatccacaattcg
acgtccttacttcaggaaatgaagtactcccttgttgattcccagaactttgttttctct
ggggctcacaaccatgctgcatccattctgccgaaatcggagcatattattagtcataag
cttgtgccacttagttccggctttcagcagttgcctaggatcacagtaactctggtgagg
tattctgctgcattgactccgtcaacctcagcagcaactgtctttgtatatcccagtgag
cctaaattcaacttggaaaggagctgttcgacatccgacgagtgcgtgagttaa
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