Phragmites australis (common reed): 133921567
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Entry
133921567 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133921567
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133921567
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Paralog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133921567
NCBI-ProteinID:
XP_062222484
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Position
6:complement(9527870..9534933)
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AA seq
575 aa
AA seq
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MASNSSAAAVAALFGIRDGDHQDQIKPLLAQQHQQPPVAPLNAASSSAGSGHATAASPPV
KKKRNLPDPDAEVIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKDP
AQVQRRRVYLCPEPTCAHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWK
AHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPHGLTAGHLYGATGAAN
MALSLPQVGSHLASTLGADGHRHHQDLLRLGGGSAATRLDHLLGSSSASAFRPLPPPSAS
VFFMGAHQEFGDGDGTGSHGFMQGKPYDGLMHLPDLQGNGAGRPSASSAPGFFNLGYITN
SANSSGTSSHGHASQGHITSDQFSGGGGGGGGSESSAAMLFSGGGNFTGGDQVAPGGMYN
EQSVMLSQMSATALLQKASQMGSSTSAHGGASVFGGLVGSSAPSAPHGRAPMVDQGQMHL
QSLMNSLAGGGMFGGGNSGNMIDPRLYDMDQDVKFSGQLGRGGAEMTRDFLGVGGGGVMR
GMPVARGEHHDGAGDMSSLEAEMKSASSSFGGRMQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaattcatcagcggccgctgtggcagcgctatttggaattagggatggcgac
caccaggatcagattaagccgctgcttgcgcagcagcaccagcagcctcctgtggcaccg
ctcaacgccgcttcttcctcggcggggtctggccatgcgacagcggcgtcaccaccagtg
aagaagaagagaaacctaccagacccagacgcggaggtgatcgcgctgtcgcccaagacg
ctgatggcgacgaaccggttcgtgtgcgaggtgtgcaacaaggggtttcagcgggagcag
aacctgcagctgcaccgccgcgggcacaacctgccgtggaagctgaagcagaaggacccg
gcgcaggtgcagcgccggcgcgtgtacctctgcccggagccgacgtgcgcgcaccacgac
cccgctcgcgcccttggcgacctcacgggcatcaagaagcacttctgccgcaagcacggc
gagaagaagtggaagtgcgacaagtgctccaagcgctacgctgtgcagtcggactggaag
gcgcactcgaagatctgcggcacccgcgagtaccgctgcgactgcggcaccctcttctca
cggagggacagcttcatcactcacagggccttctgcgacgccctcgcccaggaaagcgcg
cggctgccgccacacggcctcactgccggccacctctacggcgccaccggcgcggccaac
atggcactgagcctcccgcaggtcggatcccacctcgcgtccaccctcggcgcggacggg
cacagacaccatcaggaccttctccgtctcggcggcggcagcgctgcgactcgcctcgac
catcttctagggtcgtccagcgcctccgcgttccgacccctgccgcctccatcagcgtcg
gtattcttcatgggcgcgcatcaggagtttggcgacggcgacggcactgggtcccacggg
ttcatgcagggcaagccgtacgacggcctcatgcatctgccggacctccaaggcaacggc
gcggggaggccatcagcgtcgtcggctccgggttttttcaacctcggctacatcacaaac
agcgccaatagctcggggacttccagtcatggccatgcaagccagggacacataacaagt
gaccagttcagcggaggaggaggtggcggcggtggctctgagtcatcggctgcgatgctt
tttagtgggggcgggaactttaccggtggtgaccaagtggctcctggcgggatgtacaat
gagcagtccgtgatgctgtcacagatgtccgcgacggcgctgctccagaaggcgtcgcag
atgggctccagcacgagcgcgcatggtggcgcgtccgtgttcggaggcctcgtaggctcg
tccgcgccctccgctccgcacggcagggcgcccatggtcgaccagggacagatgcacctg
cagagtctgatgaactcgctggccggcggtggcatgtttggcggcggcaacagcggtaac
atgattgacccgaggctgtatgacatggatcaagatgtgaagtttagcggtcagctgggc
cgtggtggcgccgagatgacgcgcgacttccttggcgtcggtggcggcggtgtcatgagg
gggatgccggtggcgagaggggagcaccatgacggtgccggtgacatgagctcgttggag
gccgagatgaagtcggcctcgtcgtcctttggaggcaggatgcaataa
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