Phragmites australis (common reed): 133921661
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Entry
133921661 CDS
T10575
Name
(RefSeq) autophagy-related protein 13a-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133921661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133921661
03029 Mitochondrial biogenesis [BR:
paua03029
]
133921661
Membrane trafficking [BR:
paua04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133921661
Atg1 complex
133921661
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133921661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Ost5
Motif
Other DBs
NCBI-GeneID:
133921661
NCBI-ProteinID:
XP_062222618
LinkDB
All DBs
Position
6:11137130..11143798
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AA seq
538 aa
AA seq
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MANLSDSAGGGSGRAGAELMVPQFLLKALHAILAVRAPRPQASAPAASAAAAFRRRDRWF
HLPLHAPPPPPAAEHLPDPSPGEPLVVDVYLAQSGGGGAEEVVERWTVACEPWPSPAAAA
AVGEGLAVNRSYKRCITLLRSLYTALRFLPAYRAFRLLCASGQVYNYEMGHRVGSFAAPF
SRTEELAMRTRSFAPVETQLGRIVVSVQYLPTLAAFNFVVSSLATATIITDYVGSPAAEP
MSAFPASLTEAAGSAFPLPSRRPNSWASPAPWPHTPGQQAKFSPPPAAYASPTPSPPTFA
GGYLHSRFSGETAPMSIPQVGGGRGPVHHRNMSEPNKAIMFPPPSPKSVRGEAGIQESPK
ETSRSFRRADGIRMGDLYANLPGSKIKDSRDESGRFSGVFSSSGSPHLGVSRSSSRLSMP
DDTDDTDFPFAVDDVDPDSRPGSSGGKDVEDQAGSSSHKSQDAAVGYLVHLLKSARPLRD
PSYSTHTSRAESTEAGSTSSFMSRRTSDAFEELESFKELRENLLAHSRSRLQDSLDKP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgtcggactcggcgggcggcggcagcggccgcgccggcgcggagctgatg
gtgccgcagttcctgctcaaggcgctgcacgccatcctcgccgtgcgcgcgccgcgcccg
caagcgtcggcgcccgcggcttcggcggcggcggcgttccggaggcgggacaggtggttc
cacctgccgctccatgcgccgccgccgccgcccgcggcggagcacctgccggatccgtcc
cccggggagccgctcgtggtggacgtgtacctggcccagtcgggcggcgggggagcggag
gaggtggtggagcggtggaccgttgcgtgcgagccctggccttcacccgcggcggcggcg
gccgtgggggaggggctggcggtcaacaggtcgtacaagcgctgtatcacgttgctgcgg
tcgctgtacaccgcgctccgattcctcccggcgtaccgcgccttccgcctgctctgcgcg
tccggccaggtgtacaactacgagatgggccaccgcgtcggttccttcgccgcgcccttc
tcccgcaccgaggagttggccatgcgcacccgcagcttcgcccccgtcgagacccagctc
ggccgcattgtcgtctccgtccagtacctccccaccctcgccgccttcaatttcgtggtc
tcctccctcgcaaccgccacgatcatcacggattacgtcggcagccctgcggccgagcct
atgagcgccttcccggcatcgcttacggaggccgccggctcggcctttccgctgccttcg
aggcgccccaacagctgggcgtcgcctgcgccctggccgcacacgccagggcagcaagcg
aagttctcgccgccgccagcagcgtacgcgtcgcctacgccctcgccgcccacgtttgcc
ggtggctacctgcactcgcggtttagcggcgagactgcgccaatgagcataccgcaggtg
ggcggtggcaggggccctgtgcaccatcggaacatgtcggaacccaataaagcgatcatg
tttcccccaccttcgccaaagagtgtgcgaggggaggcagggatccaggagtccccgaag
gagaccagccggtcgttcagaagggcggatggcatccggatgggcgatctctatgctaac
ttgcctggttctaagattaaggacagtagggacgaatctggcaggttctctggtgtcttc
tcttctagtggttcgccacatcttggggtttcaagaagttcaagcagattgtctatgccg
gatgatactgatgacacagattttccttttgctgtggatgatgttgatccagattcccga
cctgggagtagtggtggaaaggacgtggaggatcaggcaggttcctcatcccataaatca
caagacgctgctgttgggtacctagtccacctgctgaagtccgcacgcccacttcgagat
cctagctactcaactcatacatcaagggccgaatctactgaagcaggcagcaccagctct
ttcatgtcccgcaggacatctgatgcattcgaggagcttgaatctttcaaagaattaagg
gagaacctgctagcacatagtagatctaggctacaagattcattggataagccctag
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