Phragmites australis (common reed): 133921672
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Entry
133921672 CDS
T10575
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 homolog
KO
K28108
shortage in chiasmata 1
Organism
paua Phragmites australis (common reed)
Brite
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Meiosis-specific proteins
Others
133921672
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GFIT
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NCBI-GeneID:
133921672
NCBI-ProteinID:
XP_062222632
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Position
6:11346905..11355973
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AA seq
1733 aa
AA seq
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MRARFLATDYFAPSPSAAAAFDQALALASLPFPSLPVPNLPPDHHLPAPFPFPADFLPAA
SVAGDDLDSLPVATALSEFLAAIIPRPLPVPHIPAADEGLDDYLYDRGGNGKGFSSTEHV
ALDIPKGLNEICCEKSEKEEGSGSEASDITKRWELLKELRFEVIEVDILPVLQSKIASLG
GEESDGGVTLSFGVPDVKIHLDFIDIDTETTITYPAELTESIYQVEKIPVKHDDDEDCSY
ARDGYCLEIAGLDPGIIIPQLEVSRNSWELDECPTKAAISNIFLNIIEHLNDGAQVHHPA
FDSTEFLKSCDMDMLAFVCEDVPRVDYRADKPITAKAVAEMDLVRINDNILVEKKSALYP
LKPDGTCSRLPCSILLEEVEIIDDPSDDVFKMLVQSDKAEMNTSDEIFKDDFNPARRFYE
SVVSSELALVDDTFKSLPTPILTDDKAMRSLLPPIEEVLCSLKPLPLSAADEIYLDWHLI
SEGPCNREICSTYASMVEEVKPCSLSSELQISSQQISALDIDFLEDFQRSAKLQHEDKQN
ELNVPVPIFHDTPANLKAAQKHRQESDSRGHSHRGKPSSEKASSLFESVSQSNDLNFYLN
VRNGNNKVKTNKNVATLDIPSSKQQAVPFSTRPKVEKLIEIHPVGLSDLIRGLIKDIHLS
YTSAFRESVYFRHSFSDGQDLSISKQKLLELITGEGSEGLLNHCKNEDKMELIVLYALKQ
VAYYLCFFGLHAAHLYIGNLTGSFENIPGRLRNIQCCIGDARLKAEKQLFESHPSLSDIE
TILRSNAQIGQKILIVADRAFWLPLGQKLTSMKITFVELGKYPSAIYSDPVSKRNSKTWV
LEELWKSDCILLDNKNIPASFPFSEFDIILEYGCPNKSSTLLSLAPKLDGLPPLHFLYVK
VDGDDFPVALLEDNHTDQDLKSTLDAVLHTLQKDLQEKMNKMRIVDSLNFIPATNQLQHL
EEKLSKHLTADSSKKIHVDGQLHDQGNLDEKNIVDSHNFVPAAEQLNTSNQITLVNSQIF
VPAVEKSSSTSSVSANVMIFPQDNQSDSDFPLNAKIDSTKSGILSADEVVIVVNTRNHGK
NMIFSRRSSYQQILGLEKGGMQVVERDVDLPVDLILSAAVCLLWYDTRTLGYSELTISEE
TSGITNFIEDIATNILMSLSFPFSGCIMVFEGENHFLSAVMEASYSLYASAASLDMNLQL
FFSQMPKSTDQIILNCIRNAARINQAPSPDISESESLAESFLMAFPSINPLSAHMILSSS
TIVDFLSWSHEQRTQAIEKYLLPPQSISLFSALCKFGELGESRSVMTECSSLDSDISSAL
LQSPKKKKKRAMQDFSVAVNAVCPNPLIQLCDYVERDNVFSPPKLRKFSHMEDAMPELPE
VFIVNQSLNMGSEGVSYQPRNHDINAISGNQMIDDDFINGLTPNLRTCNERTSSMVDTCN
FSWQSELGAEQPIKSSFPKSRPSLCRTYSHPIFPTALEINNNPGDWDISCGANQTWKGHI
HGDFATRSCRNDLGGGYHESREQIMQNPASSLAFLKQDFGCHGTSQGSGWEIDYLRQMNE
KSRACRERSRCNASATLSNSRMRDGSSRILSAPPIESFRYQRNVDTPLRNQSPSNGAHRY
GPIESLRYQRNIDTPLRGQSPSNGAHKYGKGREGTKAQSHRVRKDFKVQPSINHEKSIVP
SIEPTWTPVDKRARQKLSFATYGKEKQSKLVWRHQSSPGVGCGSRKRYREEGT
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcccgcttcctcgccaccgactacttcgcgccgtcgccgtcggctgctgccgcc
ttcgaccaggccctagccctagcgtccttgcccttcccctccctccccgtcccgaacctt
cctcccgatcaccacctccccgccccattccccttccccgccgatttcctccccgccgcg
agcgtcgccggcgatgatctcgactcgctccccgtcgccaccgcgctctccgagttcctc
gctgccatcatcccgcggcccctgcctgtgccgcatatccccgccgccgacgagggactg
gatgattacctctacgacaggggcgggaatggcaagggttttagctcgacggagcatgtt
gcactcgacatccctaagggattgaatgagatctgctgcgagaaaagtgagaaggaagag
gggtccggttcggaggcctccgatattacgaagcgatgggagctgttgaaggagctaagg
tttgaggttatagaggtcgatatcctgccggttttgcagagcaaaattgcatcacttggt
ggtgaagaatcggatggtggtgtcaccttatcgtttggtgtcccagatgtgaaaatccat
ctggattttattgatattgacactgagacaacaataacatatccagctgaacttacagag
tcaatttatcaagtagaaaaaatccctgtaaaacatgacgatgatgaggactgttcttat
gcaagagatggctactgcttggaaattgcaggattagatcctggtataataatacctcaa
ctggaggttagtaggaattcttgggagcttgatgaatgtccaactaaggcagcgatatcc
aatatttttcttaatattatcgaacacttaaatgatggagcacaagttcatcatccagca
tttgactcaactgagttcttgaaatcatgcgatatggacatgttggcctttgtttgcgag
gatgtcccacgtgtggactatcgagcagataaaccaataacagcgaaggctgtagcagaa
atggatcttgtgaggatcaatgataatattctagtcgagaaaaagtcagcattataccct
ctgaagcctgatgggacctgttcacgcttgccttgctccattcttttggaggaggtagag
atcattgatgatccttctgatgatgtcttcaagatgcttgttcagtcagacaaagctgag
atgaatacatctgatgaaatattcaaagatgattttaatccagcaagacgtttctatgaa
tcagtggttagctctgagttggctttagttgatgatacattcaaatcactacctacgcct
attctaactgatgataaagcaatgagatctttgctaccccctatagaagaagtactatgc
tccctgaaaccacttcctctatcggcagcagatgaaatttatttggattggcatcttata
tcggaagggccatgcaaccgggagatctgctctacttatgcgagcatggttgaggaggtt
aaaccttgcagtttaagttctgagcttcaaattagttctcagcagatatcagcgcttgac
attgattttctggaggattttcagagaagtgcaaagcttcaacatgaggacaagcagaat
gagcttaatgttcctgtgcctatatttcatgatacaccagctaatttgaaagcagctcag
aagcacaggcaggaaagtgatagtagaggtcatagccacagggggaaaccgagttcagag
aaggcatcttccttgtttgagtcagtgtcacagtcgaatgacctaaacttctacttgaat
gttaggaacggcaataataaagtaaaaactaacaagaatgttgctactttagacatcccc
tcttcaaaacagcaagcagttcctttttcaaccagacctaaagttgagaaactcatagaa
attcatcctgtcggcctctcagatcttatccgaggccttatcaaagacatccatctaagc
tatacgtctgcttttcgagaaagcgtatatttcagacattctttctcagatgggcaagat
ttaagcatttcgaaacagaaacttcttgaactgataactggagaaggttcagaaggcttg
cttaatcactgtaaaaacgaagataagatggagcttattgtactgtatgcattgaagcag
gttgcatattacctatgtttctttggtctgcatgctgcccatctgtacataggcaatttg
actggaagcttcgaaaatattcctgggaggttaagaaatattcaatgttgcattggtgac
gcacggttgaaagctgagaagcaactgtttgagtcccatccgtcattgtctgacatcgag
acaatcctgagatcgaatgcccaaatcggccaaaagatccttatagttgctgatagagct
ttctggctgccattgggtcaaaagctaacttccatgaagataacatttgttgagctagga
aaatacccttctgcaatttattcagatcctgtgagcaagagaaactctaaaacttgggtt
ctggaagaattatggaaatcagattgcattctgctagataacaagaacattccagcttca
ttccctttcagtgagtttgacatcatactggaatacggatgtccaaataaatcatctacc
ttgttatctctggctcccaaattagatggtttgccaccactgcatttcctgtatgtcaaa
gtggatggtgatgactttccagtcgctcttcttgaggacaaccacacagaccaggatttg
aaatccacattggatgctgttttgcatacacttcagaaagacttgcaggagaagatgaac
aaaatgcgtattgttgattcattaaactttataccggcaacaaatcaactgcaacatctg
gaggaaaagctgagcaaacatctcactgctgattcatcaaaaaaaattcatgtagatggt
caactgcacgatcaaggaaatctggatgaaaagaatattgttgattcacataactttgtg
cctgcagctgaacagctcaatacttcgaaccaaataaccttagtcaattcacaaatcttt
gtgcctgcagttgagaagagtagttctacttcttctgtatctgccaatgttatgatattc
ccccaagacaaccaatctgatagtgacttccccctcaatgcgaaaattgacagcaccaag
tcaggaatattgtctgctgatgaggtagtgattgttgtaaatactagaaatcatggaaag
aatatgatattctcccgaagatcatcttatcagcagatactaggtttggagaaaggagga
atgcaggttgtagagcgagatgttgatctgcctgtggacctaatacttagcgctgcagtt
tgtttactatggtatgataccagaaccttagggtacagtgaattaacaatatcagaggaa
acatctggtataacaaattttatagaggatattgctaccaacattctgatgtcacttagc
ttccctttcagtggctgcataatggtctttgagggagaaaaccacttcctttctgctgta
atggaggcatcttattctctatatgcttcagctgctagtctggacatgaacttgcagcta
ttcttctcacaaatgcccaaatcaacagatcaaatcattctcaattgtatcaggaatgca
gctaggattaatcaagctccttctccagatatatctgaatcagaaagcctggctgaatcc
tttctcatggcattcccttcaattaatcctctgtctgcacacatgatactttcttctagc
actattgtggatttcctcagttggtcacatgagcaacgcactcaggctattgaaaagtat
cttttgcctccacagagcatttctctcttcagtgctttgtgcaaatttggtgagctaggt
gaatcaaggtccgtaatgactgaatgctcttctttagactcagatatcagtagtgcattg
ttgcagtccccgaagaaaaagaaaaagcgtgccatgcaagacttttcagtagcagttaat
gctgtctgccctaatcctcttattcagttgtgtgattatgtagaacgtgacaatgtattc
tcaccgcctaagttgaggaaattctcacacatggaggatgcaatgcccgagctcccagaa
gtctttattgtcaatcaaagtttgaatatggggagtgaaggtgtctcttatcagccaaga
aatcatgatataaatgcaatctctgggaatcagatgatagatgatgatttcatcaatggg
ctgactccaaatctgagaacatgcaatgaaaggactagtagtatggtggacacatgcaat
ttttcttggcaatctgaattaggagctgaacaaccaatcaaaagctcctttcccaaaagc
agaccatcactctgcagaacttacagtcatccaatatttccaactgcattggagatcaat
aacaaccctggtgactgggatatttcatgcggtgcaaatcaaacatggaagggtcatata
catggggatttcgccacaaggtcttgcagaaacgatctgggcggcggatatcatgaatca
agagagcaaataatgcagaatccagcaagttcacttgcttttctgaaacaggattttggt
tgtcacggaacgtcacaaggctcaggctgggaaattgattatctaagacaaatgaatgaa
aagagcagagcatgccgggagagatctagatgcaatgcttcagcaacattgtcaaattca
agaatgagggatggctcatctagaattctgagtgctcctcctatcgaatctttcagatat
caaagaaatgtagacactcctttgaggaaccagagcccttcaaatggggctcacaggtat
ggtcctattgaatctttaagatatcaaagaaatatagacactcctttgaggggtcagagc
ccttcaaatggggctcacaagtatgggaaaggcagagaagggactaaagcacagagccat
agggtaagaaaggattttaaggtacaaccaagtataaatcatgaaaagagcatagtgccg
tccatcgagccaacgtggactcctgttgacaagagagcgagacagaaactttcatttgca
acttatgggaaggaaaagcaaagcaagctggtctggagacaccaaagcagccctggtgtt
ggatgtggctcccggaaaagataccgcgaagaaggtacatag
DBGET
integrated database retrieval system
