Phragmites australis (common reed): 133921680
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Entry
133921680 CDS
T10575
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133921680
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133921680
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133921680
Protein phosphatases and associated proteins [BR:
paua01009
]
HAD phosphatases
Fcp/Scp phosphatases
133921680
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133921680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
133921680
NCBI-ProteinID:
XP_062222642
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Position
6:complement(11544519..11559129)
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AA seq
936 aa
AA seq
DB search
MFKSMVYYGNTSIGEVEVWPKGEASAGLAVAVWAREIRVDRLSPPSERCPPLAVMHTVAV
GARCLVMESRPPTADVAPLPLVAMHAACLRDNKTAVVPLGDEELHLVAMTSRRNLANHAC
FWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTSRSFEDRIDALQRKLSNETDPQ
RISGMLAEIKRYQDDKSILKQYIEGDQVYDDGKAYKAQPEVVPPLSDNHQPITRPVIRLQ
EKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRL
LDPDSRLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRV
HVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGSFFKDFDEGLLPRISYVLYEDEVND
IPSAPDVGNYLITEDENAAVVNGNRDSLPFDGMADAEVERRMKEASSNAQAFHPTAANFV
MPVAPAHNFVSSSVAPLSPPLGMMPPPFNQPIVQPGFSDPLQGSPAREEGEVPESELDPD
TRRRLLILQHGQDTRDPTPPLPVIPPVQVPVPPVQPHGDWFPTDDSMNSSNLNRGSAGFS
LESDTMFYEKKQQPHSSFFLGGDNPMSSDRFSYQNQRFPSQLPRNEDRRMLQNHAPPKYR
SFSGEELAARHVPSSQRNSQLESGRHLAQHAGTSAGILEEIALKCGSKVEYRSTLCDTAE
LQFSIEVWIVGEKVSEGIGRTRREAQRQAAEMSLRNLANKYLSSDPNKMTDMKENGFGSN
QNFFGYPGNTRDEMLPVSTTSEESRFMKMEENNSRKTGGSVAALKELCTVEGYNLVFQAR
SSPPDGSAGIESYAQVEVGGQILGKGVGITWEEAKLQAADEALGTLRSMLGQLGQKRTGS
PRSLAQNFSKRFKPDFPRTVQRVPYGTYSRVEGHVP
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtcgatggtttattacgggaacacctcgatcggggaggtggaggtgtggccc
aagggcgaggcgagcgcgggccttgccgtggcggtgtgggcgcgagagatccgcgttgac
cgcctttcccctcccagcgagcggtgcccgccgctcgccgtcatgcacaccgtggccgtc
ggcgcccgttgcctcgtcatggagtccaggccgcccaccgccgacgtggcgccgctgccg
ctcgtcgccatgcacgctgcttgcctcagggacaacaagactgcagttgttccactagga
gatgaagagctgcatttagttgcaatgacttccagaagaaacttggcaaatcatgcatgt
ttctggggctataaattgccatttggtttgtataattcttgcttgaccatgttaaatctc
cggtgccttggtatcgtttttgaccttgatgagacattgattgtcgccaatacatcacgg
tcttttgaggacagaattgatgcacttcaaagaaagctgagtaatgagactgatccgcag
cgcataagtggtatgttagcagagatcaagaggtatcaagatgataagtccatcctaaag
caatatatagaaggtgatcaggtctatgatgatggaaaagcgtataaagcgcaacctgag
gttgttccaccattgtctgataaccatcaaccaataacacgtccagttataagactacaa
gagaaaaacattatcttgacaagaataaatcctctgataagggataccagcgttctcgta
cggttaaggccagcctgggaggaccttcgcagctacttaattgcaagaggtcgcaaacgt
tttgaggtctatgtgtgtacgatggctgagagagactatgctttagaaatgtggaggttg
cttgatccagattcaagattgattaactctgttcaacttaatgatcgaatggtgtgtgta
aaatctggtttaaggaagtccttgctaaatgttttccatgatggttcttgccatcctgga
atggcattagtaattgatgatcgtctgaaagtttgggatgagaaagatcaatctagagtt
catgtggttcctgcgttcactccatattatgctcctcaagcagaggcaaactgttctatc
ccggttctgtgtgtcgccagaaatgttgcatgcaatgtcagaggcagcttcttcaaagac
ttcgatgaaggtctcttgcccaggattagctatgttctttatgaagatgaagtaaatgat
atcccatctgctccagatgttggcaattatttgataacagaagacgagaatgctgcagta
gtgaatggaaatagagattcattgccttttgatggtatggcagatgctgaggttgagagg
agaatgaaggaagcatctagcaatgctcaagcattccatccaacagcagcgaactttgtg
atgccagtagcccctgcacataattttgtttcatcttcagtggcacctttatccccaccc
cttggcatgatgccgcctccattcaaccaaccaattgttcaaccaggtttttcagatcca
cttcaaggttctccagctagagaagagggtgaagttcctgagtctgagttggatcctgac
acaaggagaaggcttctcatattacagcatggtcaagacacaagagatcctacgcctcca
ctcccggttataccgccagtgcaagttccagttcctccagtgcaacctcatggagattgg
tttcccacagatgatagcatgaactcaagtaatctgaatagaggttcagcaggtttctct
ttagaatctgatactatgttctatgagaaaaagcaacaacctcattcttcattctttctt
ggtggggataatcccatgtcctctgatagatttagctatcagaaccagaggtttccctct
cagctaccacgcaatgaggatcgccgcatgcttcagaaccatgcacctccaaaatacaga
tccttttctggcgaggagctagcagctcggcatgttccctcaagccagagaaacagccag
ttagaatcaggaagacacttagcacaacatgcagggacctctgctggcatattagaggag
attgcattgaagtgtggatctaaggtggagtacaggtcaacattatgcgatactgcagaa
ctacagttctctatcgaggtttggattgttggagaaaaagttagtgaagggattggtagg
accaggagagaagcacagcgtcaagctgcagagatgtctttaagaaatttggccaataaa
tacctgtcgtctgatccaaataagatgactgatatgaaagaaaatggttttggtagcaac
cagaacttttttgggtaccctggaaataccagggatgaaatgttgccagtttcaactact
tccgaggaatctcgctttatgaaaatggaggagaataattccaggaaaacaggaggttct
gttgctgctctcaaggaactttgcacggttgagggatataacttggtttttcaagctcgt
tcgtctcctccagatggttcagccgggatagaatcttatgctcaggtagaagttggtgga
caaattctaggcaaaggagttgggataacatgggaagaggccaagctccaggctgctgat
gaggctcttggaactttaagatcgatgctcggtcaacttggtcagaaacggactggttct
ccgaggtcgttggcacaaaattttagtaagcgcttcaagccagattttccaaggactgtg
caaagggttccttatggtacatattccagggtagaaggccatgttccttga
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