Phragmites australis (common reed): 133921690
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Entry
133921690 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133921690
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133921690
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133921690
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
DUF7885
LRR_RPS2
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
LRR_14
F-box_5
UBA_6
Motif
Other DBs
NCBI-GeneID:
133921690
NCBI-ProteinID:
XP_062222653
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Position
6:11805317..11808161
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AA seq
417 aa
AA seq
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MATPPSGRGGALINEVLTEDELRAVLTRLGPEAERDAFGLVCHRWLQIQNSERRRLRARA
GPDMLRRLAARFTGILELDLSQSPSRSFYPGVIDDDLDVIAGSFRSLRVLALQNCKGISD
VGVAKLGDGLPSLQSLDVSRCIKLSDKGLKAVALGCQKLRHLHITGCRLITDNLLLALSK
SCLQLEELGAAGCNSITDAGISALADGCHHMKSLDISKCNKVGDPGVCKIAEFSSSCLVS
LKLLDCSKVGDQSICSLAKFCHNLETLVIGGCRNISDASIEGLAHACSSSLRSLRMDWCL
KITDMSLRSLLSNCKLLVAIDVGCCDQITDAAFQDREGNGFQSALKVLKISSCVRLTVAG
ISSVIESCKALEYLDVRSCPQVTRDSCEQAGLQFPGGCKVNFSGSLLESDPSIDRFF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccaccgtcgggccgcggcggcgccctcatcaacgaggtgctcaccgaagat
gagctccgcgcggtgctcacccggctggggcccgaggcggagcgcgacgcgttcgggctc
gtgtgccaccgctggctccagatccagaattccgagcggcggcgcctgcgcgcgcgtgcc
ggcccggacatgctgcgccgcctcgctgcgcgcttcacgggcatcctcgagctcgacctc
tcccagtcgccctcccgctccttctaccccggtgtcatcgacgacgaccttgacgtcatc
gcggggagcttccgcagtctgcgcgtcctcgcgctgcagaattgcaaaggtatctctgat
gttggagtggccaaattaggagatggactgccatctctgcagtcccttgatgtttctcgc
tgcataaagcttagtgacaaaggtttgaaggcagttgcactgggttgccaaaaactgcgg
catctgcatatcacaggttgcagattaataactgataatttattgcttgctctatcaaag
agctgtttacaactggaagagcttggagctgcaggatgtaacagcataacagatgccggt
atctctgcactagccgatggctgccatcatatgaaatcactggacataagtaaatgcaat
aaagttggtgatcctggagtctgtaaaatcgctgagttttcttcatcatgcttggtgtca
ctaaagctgttggactgcagcaaagtgggggatcagtcaatctgttcattagctaagttc
tgccataacctagagactcttgtcattggtggatgtcggaacattagcgatgcatccata
gaaggacttgctcatgcctgctccagcagcttaaggagcctaagaatggactggtgctta
aaaataacagacatgtcattgcgaagcctgctatctaactgtaaacttcttgtggctatt
gatgttgggtgctgtgaccaaataacggatgcggcatttcaggacagggaaggaaatggg
tttcagtctgcattgaaagttttgaaaatcagcagttgtgttaggctcacagttgcagga
atcagcagtgtgattgaatcatgcaaggctcttgagtacctggatgttcggtcatgtccg
caggttacgagagacagctgcgagcaagctgggttgcagtttcctggtggctgtaaggtg
aatttctctggcagcttgttggagtctgatccatctattgataggttcttctag
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