Phragmites australis (common reed): 133921908
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Entry
133921908 CDS
T10575
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
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NCBI-GeneID:
133921908
NCBI-ProteinID:
XP_062222985
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Position
6:complement(15985998..15989893)
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AA seq
701 aa
AA seq
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MLVSQSSMSGAGEAGVRTVVWFRRDLRVEDNPALAAAARTAGEVVPAYVWAPEEDGPYYP
GRVSRWWLSQSLKHLDASLRRLGAGRLVTRRSADAVVALLDLVRSTGATRLFFNHLYDPL
SLVRDHRVKELLTAEGITVQSFNADLLYEPWEVLHDDGCSFTMFAPFWNRCLCMPDPAAP
LLPPKRINSGDLTRCPSDELVFEDESERGSNALLARAWSPGWQNADKALTAFLNGPLIDY
SVNRKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGEESCTLFLRSIG
LREYSRYLTFNHPCSLEKPLLSHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATG
WLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDR
IDNPQFEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGVELGSNYPRPIV
ELDAANSRLQDALSEMWELEAASRAAMENGMEEGLGDSSEVPPIAFPQELHMDVDREPVR
PAMQTPTMAVRRRQDQMVPSMTSSLVRAETEVTADFGHNSEDSRPEVPSNVHLQPQTERE
ETVDGGGGNAVRMNTIHQQHNLQNALHRMRGVVPSTSEASSSWTGREGGVVPVWSPPAAS
VHSDPYAADEADISSRSYLDRYPQSHTMMNWTQLSQSLTTG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgtcgcagtcgtcgatgagcggcgctggggaggccggggtgcggacagtggtg
tggttcaggcgggacctgcgggtcgaggacaacccggcgctggcggcggcggcgcggaca
gcgggagaggtggtgccggcgtacgtgtgggcaccggaggaggatgggccgtactacccg
ggaagggtgtcccggtggtggctcagccagagcctcaagcacctggacgcctcgctccgc
cggctcggtgccggccgcctcgtcacgcggcggtctgccgacgccgtcgtcgcgctgctc
gacctcgtccgcagcaccggcgccacacgcctcttcttcaaccacctctacgacccgctg
tcgctggtccgggaccaccgggtgaaggagctgctgacggccgagggcatcaccgtgcag
tccttcaacgccgacctgctgtacgagccgtgggaggtcctccacgatgacggctgctcg
ttcaccatgtttgcgcccttctggaacaggtgcctgtgcatgcccgatcccgccgcgccg
ctgctgccgcccaagaggatcaattcaggtgacttgacgaggtgcccgtcagacgagctg
gtcttcgaagacgagtcagagagggggagcaatgcactgctcgcgcgggcgtggtcaccg
gggtggcagaacgccgacaaggcactgacggccttcctcaacggcccgctgatcgactac
tccgtgaaccgcaagaaggctgacagcgcgagcacgtccctgctctcgccgtacctgcac
ttcggcgagctcagcgtccgcaaggtcttccaccaggtcaggatgaagcagctgatgtgg
agcaacgaaggcaaccacgccggcgaggagagctgcaccttgttcctccggtccatcggc
ctgcgggagtactcgaggtatctaactttcaaccacccctgcagcctcgagaagcccctt
ctgtcgcacctcaggttcttcccctgggttgtcaacgaggtgtacttcaaggtctggagg
caggggaggaccggctaccctcttgtcgacgcaggtatgagggagctctgggcgactgga
tggctgcacgatcgcatacgcgtcgtggtctcaagcttctttgtcaaagtgctccagctg
ccatggcgctgggggatgaagtacttctgggacaccttgctggacgccgacctcgagagc
gatgcattgggctggcagtacatttccggttctctccctgatggccgtgagcttgaccgc
atcgacaaccctcagtttgaagggtacaagttcgacccacacggggagtacgtccggcga
tggctaccagagctggcaaggctgccaacggaatggatacaccacccttgggatgcaccc
gagtcagtgctgcaggctgcaggagttgagctaggctctaactaccctcgccctatcgtt
gagctagatgcagccaattccaggttgcaggatgccttgtcggagatgtgggaacttgag
gcagcctctcgcgctgcgatggagaacggaatggaagaaggcctcggcgactcctcagag
gtgccaccgattgccttccctcaagaactgcatatggatgtcgaccgagaaccagtccgg
cctgctatgcagacaccaacaatggccgttcggagacgacaagatcagatggtgcctagc
atgacttcctcattggtcagagctgaaacagaagttaccgcagattttgggcacaacagc
gaggacagtaggccagaagtgccatcaaacgtgcacttgcagcctcagacggagagggaa
gaaacagtcgacggtggtggtggcaatgctgtcagaatgaacaccattcatcagcagcat
aaccttcagaacgccctacaccgtatgcggggtgttgtgccatccacgtcggaggcatcg
agcagctggacgggcagagaaggcggggtggtaccggtctggtcacctccggcagcatca
gtccattccgatccttacgccgcggatgaggctgacatttccagtagaagttatttggac
aggtatccgcaatcacatacgatgatgaactggactcaactctcgcagtcattgacaact
gggtga
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