Phragmites australis (common reed): 133922055
Help
Entry
133922055 CDS
T10575
Name
(RefSeq) heat stress transcription factor A-3-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133922055
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133922055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CC_Bre1
LRRFIP
Nup88
APG6_N
Seryl_tRNA_N
PSME4_C
Motif
Other DBs
NCBI-GeneID:
133922055
NCBI-ProteinID:
XP_062223196
LinkDB
All DBs
Position
6:19365791..19369244
Genome browser
AA seq
522 aa
AA seq
DB search
MSSPSRRACTPHPSYAAMDGAHADANTPNAPYAAAAGSSMEAAALLLEPKLEDEATLQLS
STGPLVPLDQLMPGPGPGPAVAVPAEPPRPRPLEALLQGPQLPPFLSKTYDLVSEPALDG
VISWGAAGNSFVVWNPSTFARDVLPHHFKHNNFSSFVRQLNTYGFRKVHADRWEFAHEDF
LRDSKHLLKRIVRRRSSPMQQSSIQPSSSSGESCLDPELHTLRREKNALLEEVAGLKQEH
RQTIEHMSTLNNRLESADDRQKQMISFLAKLVQNLSFVRQLKLHREQKEIDSTRVKRKFL
KHVPHGSIDSGEFSSQHTGESGSYFPASSPMATSVHDDIADFQNFLLEDDDFNCGMHPDN
IGLEGVDALVQGFDTQEELELGSGAELLEMPPASGPLGQDPTIVWSTGKNVLFPGLDATS
SEADCLGSLSDNMGVFPGTILQTTGKMMSADDEQMWGVDVSSALQSSGSGTCQQAFSSLT
SDTYLMDMTNKLEKFWDLDFQALDEGDLQLDKCAIDDPSLQQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccttcccggcgcgcttgcaccccgcacccatcgtatgcagccatggacggc
gcccatgccgacgcgaatacccccaacgcgccctacgccgccgccgccggctcctcaatg
gaggccgccgcgctgctgctagagcccaagctcgaggacgaggcgacgctgcaactatcg
tccactggccccttggtgcccctggaccagctgatgccggggccggggccggggccggcg
gtggcggtgccggccgagccgccgcggccgcggccgctggaggcgctgctgcagggcccg
cagctgccgcccttcctgtccaagacgtacgacctggtgagcgagccggcgctggacggg
gtcatctcctggggcgccgccgggaacagcttcgtggtctggaacccctccaccttcgcg
cgcgacgtgctgccgcaccacttcaagcacaacaacttctccagcttcgtcaggcagctc
aacacctatggtttccgtaaagttcatgctgacagatgggagtttgctcatgaggatttc
ctgcgagatagcaagcatctgttgaagaggattgtcaggcgcaggtcctccccaatgcaa
cagagcagcattcagcctagctcttcttctggagaatcctgcctggaccctgagctccac
acgctgagaagagagaagaacgcattgcttgaggaggtggccgggctaaaacaggagcat
cgtcagacaattgagcacatgagcacgctgaataacaggctggaatcagcagatgaccgg
cagaagcagatgatctctttcctggctaagctcgttcagaacctgagtttcgtgaggcaa
ctgaagctgcacagggagcagaaggagatcgactccacaagggtgaaaagaaagtttctg
aagcatgtaccacatggcagcatagactcaggtgagttcagctcacagcataccggagag
agtggttcgtattttcctgcaagttcccctatggctacaagcgtgcacgacgacattgca
gactttcagaattttcttttggaagatgacgacttcaactgtggtatgcatccagacaac
attgggcttgaaggagtcgatgcactggttcaggggtttgacacacaagaggaacttgag
cttggcagtggagctgagctacttgagatgcctccagcttctggtccgcttggccaagat
cccacaattgtctggtccacgggaaagaatgtgctgtttccaggattggatgctacctct
tctgaagccgactgcctaggatcgttatccgacaatatgggggtgtttccaggcaccata
ttacagacaacaggcaagatgatgagcgctgatgatgagcaaatgtggggtgtggatgtt
tcatcagctttgcaaagctctggcagtggcacttgtcaacaagccttcagtagcctcact
agcgatacctatctaatggacatgaccaacaagcttgagaaattctgggaccttgatttc
caggcactggatgagggagatctgcagctggacaagtgtgctattgacgaccctagtctt
cagcagtaa
DBGET
integrated database retrieval system
