Phragmites australis (common reed): 133922060
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Entry
133922060 CDS
T10575
Name
(RefSeq) chaperone protein ClpD1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
paua03110
]
133922060
Chaperones and folding catalysts [BR:
paua03110
]
Heat shock proteins
HSP100
133922060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
Sigma54_activat
AAA_16
nSTAND3
NBD_SMAX1
AAA_7
IstB_IS21
AAA_14
NACHT
AAA_18
ATPase_2
AAA_25
Zeta_toxin
Torsin
Ribosomal_S11
Motif
Other DBs
NCBI-GeneID:
133922060
NCBI-ProteinID:
XP_062223202
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Position
6:complement(19505081..19510289)
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AA seq
951 aa
AA seq
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MEVCSCSTSSSVVPAGDRAGRRFAAAPSAAAVRWWGAAGAGRAVVLAQPLLRPAAVARPA
QAPSRRARARRGGGVIKAVFERFTERAVKAVVLSQREARGLGEAAVAPRHLFLGLVAEDR
SPGGFLSSGINIERAREECRGIGARGADAPAAAPSTAGSGLDTDVPFSTSSKQVFEVAVV
LSRNMGSSFISPEHLAIALFTLDDPTTNNLLRSLGADPSQLASAAVHRLHAELAKDGREP
AGASSFKVPEKSPAGTGRSAFSKSLNKKKDKGALDQFCLDLTTQASGGFIDPIIGREEEI
ERVVQIICRRTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIA
GAKERGELESRVTSIIREVREAGDVILFIDEVHNLIGSGTVGKGKGAGLDIGNLLKPPLA
RGELQCIAATTLDEHRMHFEKDKALARRFQPVLVDEPSQEDAVKILLGLREKYETYHKCK
FTLEAINAAVYLSARYIPDRQLPDKAIDLIDEAGSRARMESFNRKKEEQSSILLKSPDEY
WQEIRAAQAMHEVVSSNKMKYNSNENDQKSGTTDVEAPCEDNTGSTSTASLSADELVVVG
TEEIARVASLWSGIPVQQLTADDKKILVGLDDELRKRVIGQDEAVVAISRAVKRSRVGLN
DPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPG
YIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNT
LIVMTSNVGSTSISKGRQSMGFLKEDTESSSYVAMKSLVMEELKAFFRPELLNRIDEMVV
FRPLEKSQMLAILDIILKEVKGRLLALGIGLEVSDAMKDLICQEGYDKSYGARPLRRAVT
HLIEDVISEAILFGEFKPGDTILMDIDAEGKPCLSHLDEQIVQVSDPTRTF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtgcagctgctccacctcgtcgtccgttgtccccgctggggatcgcgccggc
aggaggttcgccgccgcgccgtcggcggccgcggtgcggtggtggggcgcggcgggggcc
gggagggcggtggtgctggcgcagccgctgctgcggccggcggctgtggcgaggccagcg
caggcgccctcgcggcgcgcgcgggcgcggcgcggcggaggggtgatcaaggcggtgttc
gagcggttcacggagcgggccgtcaaggcagtggtgctgtcgcagcgggaggcccggggg
ctcggggaggccgcggtggcgccgcgccacctcttcctcgggctcgtcgcggaggacagg
tcccccggcggtttcctctcgtcggggatcaatatcgagcgcgcgcgcgaggagtgccgc
ggcatcggcgccaggggcgcggacgcgcccgctgcggcgccgtcgacggccggatcgggg
ctcgacaccgacgtgcccttctccacgagcagcaagcaggtgttcgaggtggccgtcgtg
ctgtccaggaacatgggctccagcttcatctcgccggagcacctcgccatcgcgcttttc
accctcgacgatcccaccaccaacaacctccttaggagtttgggagcggatcccagtcag
ctagcatctgctgcggtccaccgtctgcatgcggagcttgcaaaagatggcagagaacct
gcaggagcatcttctttcaaagtcccagagaaatctcctgctggaactggaagatctgcc
ttctccaaatccttgaataaaaagaaagataagggtgcacttgatcaattttgtttagat
ttgaccacacaagctagtggaggtttcatcgatcctataataggtcgtgaggaggagatt
gagagagttgttcagataatatgccgacggacaaagaacaatcctattcttttgggtgag
gcaggtgttggcaaaactgcaattgctgaggggctggctcttagaattgcaaatggagat
gtccccatttaccttgtggcaaagcgtataatgtcactggatgttggtctacttattgct
ggtgcaaaagagaggggtgaattggagtctagggttaccagtataattcgtgaagtccgg
gaagcaggtgatgttattcttttcatcgatgaggttcacaatcttattggatctggaact
gttggaaagggtaagggtgccggccttgacattggcaacttgctgaagcccccgctcgct
agaggtgaattgcagtgcattgcggctacaactctagatgaacatcgaatgcattttgag
aaggataaggctttggcccggcggttccagccagtattagtagatgagcctagtcaggaa
gatgctgtgaagattttacttggtcttcgtgagaaatatgaaacttaccataaatgcaaa
ttcactttagaagcgatcaatgcagcagtttatttgtcagcaagatatatacctgacaga
cagcttcctgataaggctattgatctgattgacgaagctggaagtagagctcggatggaa
tcatttaacaggaagaaggaagaacagtcttcaattctcttgaagtcaccggatgaatac
tggcaagagataagagctgctcaggccatgcatgaagtggtgtcatctaacaagatgaaa
tataattcaaatgagaatgatcaaaagagtggtactactgacgttgaagcaccttgtgaa
gacaatactgggtcaacatctaccgcgtcactctcagctgacgaactagttgtagttggg
acagaagagattgcaagagttgcctcattatggtcagggataccagtacagcagttgact
gctgatgataaaaagattttagtaggactagatgatgagctcagaaaacgtgtcattggc
caagatgaagctgttgtggcgatatctcgtgcggtgaagagatcgcgtgttggccttaat
gaccctgacagacctattgctacactgcttttctgtggtccaacaggagttggtaaaacc
gagcttaccaaagctctagcagcaagttattttggatcagaatctgctatgcttagatta
gacatgagcgagtatatggagaggcacactgtgagcaagctgataggctctcctccaggg
tacatcggatatggtgaaactggtactttgacagaagcagtcaggagaaaaccatttacc
gtagtattgcttgatgagatagagaaagctcaccctgatattttcaatatccttctccaa
atctttgaagatggacatctgacagactcgcagggccgcagagtttccttcaagaatacc
ttgattgtcatgacgtcaaatgttggttctacatcaatttcaaagggaagacagagcatg
ggtttcttgaaggaagatactgagtcaagctcgtatgtcgcaatgaaatcccttgtaatg
gaagagctgaaggcatttttccggccagagttgctcaatagaattgatgagatggttgtg
ttccgtcctctggagaagtctcagatgctggccattcttgatatcatcctgaaagaagtg
aagggcaggcttttagcccttgggataggcttagaggtttctgatgcaatgaaagacctg
atttgccaagaaggatacgacaagagctacggcgcgaggccgctgaggagagctgtcacc
cacctgattgaggatgtcatcagcgaagcgattctttttggcgagttcaagcctggtgac
acgatactgatggacatcgatgccgaggggaagccttgcttgagccatctggacgaacag
atcgtccaggtttctgacccaacacggacattctga
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