KEGG   Phragmites australis (common reed): 133922103
Entry
133922103         CDS       T10575                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03030  DNA replication
paua03410  Base excision repair
paua03420  Nucleotide excision repair
Brite
Enzymes [BR:paua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     133922103
DNA replication proteins [BR:paua03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    133922103
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      133922103
SSDB
Other DBs
NCBI-GeneID: 133922103
NCBI-ProteinID: XP_062223260
LinkDB
Position
6:21310803..21340427
AA seq 2219 aa
MSGRRRPSAGGRGTGGGGGGGGGGWRRNGSSAAKEQRLRLGAEELLESRLGFTPYTDGEG
RLGWLLTFSPSSWEDEDTGKIYNCVDLYFVSQDGSTFKVKYKFRPYFYAATKDKMELEVE
AYIRRRYEGEISDIEIIEKDDLDLKNHLSGLKRKYLKLQFDTIQQLMRVRNDLLHAVEKN
EEELDAAEAFETIHGVKRVERPQDYINCIIDLREYDVPYHVRFAIDNDVRCGQWYNVSVA
SSDVLLQRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMIDGQGYLIINRE
CVGEDIEDLEYTPKPEFEGYFKVKNVPTELDLLEAWFSHMQEVKPGIYVTYNGDFFDWPF
LEKRAAHHGIKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKVVTKA
KLGYDPLEVNPEDMVRFAMDQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPD
EVLRKGSGTLCEMLLMVQAFKANIICPNKHQADLEKFYNNRLLESETYIGGHVECLETGV
FRSDLPTKFQLESSAYEQLIGNLDRDLQYAISVEGKLDIDSVTNYDEVKDAIKQKLVSLR
DHPVREERPLIYHLDVAAMYPNIILTNRLQPPSIVTDVECTACDFNRPGKNCLRKLEWVW
RGETYMAKKNDYYHIKRQIESELIQSGSMTSSKPFLDLSKPEHLLKLKDRLKKYCQKAHK
RVVDKPITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLAEAKASGNSIKI
QEAQDMVALYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVE
KIGRPLELDTDGIWCVLPGSFPENFTFKTKAGKKLTISYPCVMLNVDVARNNTNDQYQTL
KDPVNKLYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLAELKGFEI
KRRGELKLIKVFQAEVFDKFLHGSTLEECYAAVASVANCWLDLLDNQGIDIADSELLDFI
SESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSERA
VPVAIFETDPEIAKHYLRKWCRMSSDASIRSIVDWSYYKQRLSSAIQKIITIPAAMQKIS
NPVPRVLHPDWLHKKVREKDDRFRQRKLRDIFSPLAKDEGMQNLDGVGDMEDLLASNKDS
RKNPASNGLNIDKENNPNGPSVEAGSDNSKNKQKPLTGSNMPLSSQFQNDATDETVDRNT
DYQGWLHAKKRKWKYVRDQKKRRRLGAATTFDGPTNSLFSVRNVNQLHGNNRNRSGNNRN
QSTFFQKQELALFRSHWQIIQLASSTIPGCFFAWVVAEGIMFKIPISVPRVFYLNSKAPV
TDEFPGRRVKKILPHGRPCFNLIEVATSEEQFRAEGKKIAAHLAEPDVEGIYETKIPPEL
NIILQIGCVCKVDKSAKKRSIQDGWDLAELQMKTTAECSYLEQTVSFFYLYHSLSEGRAV
YVLYFPASFRIHGVVVNPFRNKELSPSFLEKQFRDACQAFGSMPENLTFNVDYQTSIDAG
SKHVQIMLLEYRQQHPGPVIGVIECPKLEDIKAAVRALDDFPCVTIPCNARDNNYQALGW
QATAGRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSRALRDQQQVL
WISDDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVSVELKIHHLAVNSLLKSSQVDE
MDGGSIGSFGRDMAPGPQAAETDFDDPSLCAPAFQVLKQLIQRCISDAVSSGNVFADAIL
QHLYRWLCSPRSKLHDPALHRLLHNVMKKVFALMLAEFRKLGANVIFANFSKIIIDTGKV
DLSSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKTQDADCSDGD
NDIDIVSSWNIAEYLPKPTQDHFVLIISEFLYIPWKYMQEVAKQATIRDDTSCTPSITVM
AAENLEGQVIGYLCDQISTFFADKLLKIVSDILHHFKGKSKFESNEPTNRESSPHRHKGD
AALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICS
YCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVRQRERLYHLQDLVCL
RCRQVKAAHLSEQCSCGGSFRCKEESSYFLSKMRVFLNVAASQKFQLLQDCVQWILEVR
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgagcgggcggcggcggccgtctgctggaggaaggggaaccggaggcggaggcggaggc
ggaggcggcggctggcggaggaatggatcgtcggcggcgaaggagcagcggctgcgtctg
ggggcggaggagctcctcgagagccgcctcggcttcacgccctacaccgatggcgagggc
cggctcgggtggctcctaaccttctccccctcatcatgggaagatgaggacactggaaag
atctacaactgtgttgatctgtactttgtgtcacaggatggttctacattcaaagtgaaa
tacaagtttcgaccttatttttatgctgcaacaaaggacaagatggagttggaagttgag
gcgtatattaggcgacgttatgaaggggaaatttctgacatagaaataattgagaaagac
gatctagatctaaaaaaccacctttctggcttaaagagaaaatatttgaagcttcagttt
gataccatacaacaattaatgcgtgtaaggaatgacctattacatgctgttgaaaagaat
gaagaagaactagatgctgcggaggcatttgaaacaattcacggtgtaaaaagggtagaa
aggccacaagattacataaactgcatcatcgatttgcgtgaatacgatgttccatatcat
gttcgttttgctattgataatgatgtgagatgtggacagtggtacaatgttagcgtagct
agttctgatgttttgcttcagagaagggaagatctgcttcaacgtgcagaagttcatgtc
tgtgcgtttgatattgaaaccacaaagctgcctctaaagtttccagatgctgaatatgac
agtgtaatgatgatttcgtacatgattgatgggcaagggtacctgataatcaacagagag
tgtgtaggggaagatattgaagatttggagtacacacctaaaccagaatttgagggttat
tttaaagttaagaatgttcctactgagttggatctacttgaagcttggttttctcacatg
caagaggttaagcctggcatttatgttacatacaatggtgacttttttgattggccattt
ttggagaagagggctgctcaccatggaataaagatgaatgaggagattggttttcaatgt
gacaataatcagggggagtgtcgggctaaattttcttgccatcttgactgttttgcttgg
gtaaagcgagacagttaccttccacaaggaagccatggcctaaaggttgttacaaaagcc
aagctaggttatgatcctctggaggttaatccagaagatatggtccgctttgcaatggac
cagccacagacaatggcttcttattctgtatcagatgctgttgcaacatactatctatac
atgacttatgttcatccattcatcttttctcttgcaaccataatacctatgtcacctgat
gaggtattgcgtaaaggaagtggaacactttgtgaaatgctgctaatggtccaggcattc
aaggctaatatcatttgtcctaacaaacaccaagctgatctggagaagttctacaataac
cgtctactagaaagtgaaacctacattggcggtcatgttgagtgtcttgaaactggtgta
tttagatcggatcttcctacaaagttccaacttgaatcatcagcatatgagcaactgatt
ggaaatcttgatcgtgatctgcaatatgccatttccgtagaaggaaaattggatattgat
tctgtcacaaattatgatgaagtcaaagatgccataaagcagaagcttgtttcgttgcga
gatcacccagttcgtgaagaacgccctcttatatatcatctggatgttgctgcaatgtat
ccaaatatcattttgacaaatagactccagccaccgtccatagttacagatgtggagtgc
acagcatgtgatttcaatcgccctggaaagaattgcctcagaaaacttgaatgggtctgg
cgaggagagacctacatggcaaaaaagaatgactattatcacataaagaggcaaattgag
tcagagctgattcaatctggtagcatgacatcgtcaaagccttttcttgacctctctaaa
ccagaacatttacttaaactgaaggatcgtttgaagaaatactgccaaaaggcacacaaa
agagtagttgataaaccaattacagaagttagagaagctggaatatgcatgcgtgaaaat
tctttctatgtagacacagtacgaagctttcgtgatagaaggtatgaatacaaaggtctt
aacaaaacttggaaaggaaaattggcagaagcaaaagccagtggaaattctatcaaaatt
caggaagcgcaggacatggttgctctttatgattctttgcaacttgctcacaagtgcata
ttgaattctttttatggatatgttatgcgcaagggtgcaagatggtactctatggaaatg
gctggtgttgtaacatatactggtgcaaagattatccaaaacgctcgactacttgtagag
aaaattggaaggccactggaactggatacagatggcatttggtgtgttttgcctggttct
tttccagagaacttcactttcaagacaaaagctgggaagaagctcacaatatcttatccc
tgtgtaatgcttaatgttgatgttgcaaggaacaacactaatgatcaatatcaaacactg
aaagatccagtaaataaactatatacaacacacagtgagtgttccattgaatttgaggta
gatggaccttacaaggctatgatcctacctgcctctaaagaggaagggattttgataaag
aagaggtatgctgtcttcaatgaagatggcaccttggcagaacttaaaggttttgagatc
aagcgtagaggtgagctgaagctcatcaaagtttttcaggcagaggtatttgacaaattt
ctccatggttcaactttagaggaatgctatgctgctgttgcctctgttgctaactgttgg
ctagacctactggacaatcaaggaattgatattgctgacagtgagttgcttgatttcata
tcggagtcaagcactatgagtaaatccctagttgattatggagagcagaagtcgtgtgct
gtaactacagcaaaaagacttgctgaattccttggagattcaatggttaaagacaaaggg
ctgcattgccaatatatcgttgcccgggagccacaaggcactccagtgagcgagcgtgct
gttccggtagctatatttgagacagatcctgagattgcaaaacattatttaaggaaatgg
tgcagaatgtcctctgatgcaagcatccgatctattgttgattggtcttactacaagcaa
cgcctaagctcagctattcagaaaatcataacaattcctgcagcaatgcaaaagatctca
aaccctgttcctcgagttcttcatcctgattggttacacaaaaaggtcagagagaaagat
gatcgatttcgccagcgtaaactacgtgatatctttagccccttggccaaagatgagggg
atgcagaacttggatggggttggagatatggaagatttattagcatcaaacaaagattcg
agaaaaaatcctgcatccaatggcttgaacatcgacaaagaaaataatccaaatggacca
tcagtggaagctggttcagataatagtaaaaacaagcaaaaacctctaactggatcaaat
atgccactctcttcgcaattccaaaatgatgccactgatgaaacagttgatagaaatact
gattatcaaggatggcttcatgctaagaagagaaaatggaaatatgttcgcgaccaaaag
aaacgtcgaaggttgggtgctgctaccacttttgatgggcctactaattctttgttttct
gtgagaaatgtcaatcagttgcatggaaacaataggaaccgatctggaaacaataggaat
caatctacatttttccagaaacaagaattggccctctttagatctcattggcagataatc
cagcttgcttcaagtacaatccctggctgcttttttgcatgggttgttgctgagggaatc
atgttcaagattcctatcagcgtgcctagagttttttatctaaactcaaaggctcctgtc
acagatgagtttccaggaaggcgtgtgaaaaagattcttcctcatggaagaccttgtttc
aatctcattgaggttgcaactagtgaagaacagttcagggctgaaggcaaaaaaattgct
gcacatctagcagagccagatgttgagggaatatatgagacaaaaattccaccggagctc
aatatcattctccaaattggctgtgtatgcaaagtggacaagtctgcaaaaaaacgaagt
atacaagatggatgggatcttgctgagttgcaaatgaaaacaaccgcagagtgctcatac
ctggaacaaacagtttcatttttctatttatatcacagcttgtctgaaggaagggctgta
tatgtcttgtactttcctgcatctttcagaatacatggagtggtcgtcaatcctttccgt
aataaagaattatctccgtcatttcttgaaaagcaatttcgagatgcttgccaagctttc
ggttctatgcctgagaatcttactttcaatgtggactaccaaacatcaattgatgcaggt
agcaaacacgtgcaaataatgttacttgagtacaggcaacaacatcctggacctgtcata
ggcgtcatagaatgccctaaactcgaagatataaaggcagctgtacgagcccttgatgat
ttcccgtgtgtaaccattccttgtaatgcacgggacaacaactatcaggctctcggttgg
caagcaacagctggtcgaacaagcatgcagcgttgtgctgcatcaacccagtggttcaat
gaacgaatttcactcgctagatatgcacatgtgccattgggaaattttgaactagattgg
cttctttttactgctgatgtgttcttttcaagggcattgcgtgatcaacagcaggtacta
tggatatctgatgatggcattcctgatttaggaggcacttacgaaggagacacatgcttt
gctgatgaggtcattcagcctgcgcttacttatcctggtgcatacagaagagtttctgtt
gagctgaagatccatcatttggctgttaattctctcctgaagagcagtcaagtggatgaa
atggacggaggatccatcggtagctttggaagagacatggcacctggtccacaggccgct
gaaactgactttgatgatcctagcttatgtgcacctgctttccaggtgctaaagcaactc
attcagagatgcatttcagatgcagtgtcgtctggaaatgtattcgctgatgcaatattg
caacatctctaccgttggctttgcagcccacggtcgaaacttcatgacccagctctccat
cgccttcttcataatgttatgaagaaggtatttgctctaatgttggctgagtttcggaag
cttggagctaatgttatctttgcaaacttttctaagataatcattgatactggaaaagtg
gatttgtcatcggcacgtgcatactgtgatagcttattaaagaccttacagacaagggac
ctttttgagtggatagagctggaacctttgcactattggcattccttattgttcatggat
cagtataactatggtggcattcaggctaaaacacaagatgcggactgttcagatggtgat
aacgatattgatatagtctcaagctggaacatagcagaatacttgcccaaacctacacag
gatcactttgtcttaatcatctcagagttcttatatattccatggaaatacatgcaagaa
gtagctaagcaagcaactataagggatgatacctcatgcactccatctataacagtcatg
gctgctgagaatcttgagggtcaggtcataggatatctctgtgaccagatcagcactttc
tttgcagacaagcttctaaaaattgtaagtgatatacttcaccatttcaaagggaaaagc
aagtttgaatcaaatgaaccaacaaatagagaatccagtcctcacagacataaaggagat
gctgcattggagttcattaagcatatctgtgctgttcttgctcttgatcagaatgttcag
catgatattctgagaatgaggaagaacttgttaaagttggttcgtgtaaaggagtttgct
ccagaagcacaattccaagacccatgtgcctcattcactctcccaaatgtgatttgcagc
tattgcaatgattgccgggatcttgatctctgccgtgattcaacactccaaggccaggag
tggagatgtgcggtgccgcagtgtgggcagccataccaccgtgagcagatggaaaatgca
ctactacaggtagtccgccagcgagagaggctgtaccacttgcaggatctggtctgcctc
cgctgcaggcaagtaaaagccgcccatttgtccgagcagtgctcctgtggaggctcgttc
cggtgcaaggaagaatcatcgtattttcttagtaaaatgcgggtattcctgaacgtcgcc
gccagccaaaaattccagctcctacaagactgcgtgcaatggattcttgaagtcagatga

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