Phragmites australis (common reed): 133922180
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Entry
133922180 CDS
T10575
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00300
Lysine biosynthesis
paua00470
D-Amino acid metabolism
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
paua01230
Biosynthesis of amino acids
Module
paua_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
133922180
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
133922180
Enzymes [BR:
paua01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
133922180
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
133922180
NCBI-ProteinID:
XP_062223374
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All DBs
Position
6:complement(26987860..26996370)
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AA seq
488 aa
AA seq
DB search
MAAANLLSRSLLPPLNPSPSAHPNRGSPAALSFPRRHGRLISLRASISTASPSPPPQPGA
AMGAPKHCFRRGADGHLYCERVRVEDAMEAAERSPFYLYSKQQVVRNFASYRDALQGLRS
VVGYAVKANNNLPVLRLLRELGCGAVLVSGNELRLALHAGFDPTRCIFNGNGKTLDDLLL
AAKSGVFVNVDSEFDLGNIVEAARCAGKKVPVLLRINPDVDPQVHPYVATGNKTSKFGIR
NEKLQWFLDSIKSYSNDIKLVGVHCHLGSTITKVDIFRDAAVLMVNYVDEIRAQGFELEY
LNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNKVTG
VKSNGTKNFIVVDGSMAELIRPSLYGAYQHIELVSPPSPDAEVATFDIVGPVCESADFLG
KDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEEDGSIVKIRHEEKLDDYM
RFFDGLPA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgaacctgctctcgcgctcccttctcccccccctaaaccctagtccctcc
gcccaccccaatcgcggtagccccgccgccttatccttccctcgccgccacggccgcctg
atctccctccgcgcctccatctccacggcctccccgtccccgccgccgcagccgggagca
gcgatgggggcgccgaagcactgcttccggcgcggcgctgatgggcacctatactgcgag
agggtgcgggtggaggacgccatggaggcggcggagcgtagccccttctacctctatagc
aagcagcaggtcgtccgcaatttcgcctcttaccgcgacgccctccaggggcttcggtcc
gtcgtgggatacgccgtcaaggccaacaacaacctacccgtgctgcggctcctgcgcgag
ctaggatgcggcgcggtcctcgtcagcggcaacgagctccgcctcgccctccatgcagga
ttcgaccccaccaggtgtatatttaatggaaatgggaagacgttggatgatctcctttta
gctgctaagagtggagtatttgtaaatgtagacagtgaatttgatttgggtaacattgtc
gaagctgcaaggtgtgctggaaagaaagtgcctgttttgcttagaataaatcctgatgtg
gatccgcaggttcatccctatgttgccactggaaataaaacttccaaatttgggattcgc
aatgagaaattgcaatggtttttggactctatcaagtcatactcaaatgatatcaaactg
gttggtgttcattgtcatctgggatctaccattacaaaggttgatatattcagggatgct
gctgttcttatggtgaattatgttgatgaaattagagcacaaggttttgagctggagtac
ctgaatattggaggtggtttggggatagattaccaccacacggatgcagtcttgcctaca
cctatggatctcatcaacactgtgcgagaactagttctctctcgagatcttactcttatc
attgaaccgggaagatccttgattgctaatacttgctgctttgtcaataaagtcactggt
gttaaatctaatggtacaaagaattttattgttgttgatggcagcatggcagaactaatc
agacctagtctatatggagcatatcagcatatcgaactggtttctcccccctctcctgat
gcggaagtagcgacctttgatattgtcggaccagtttgtgagtctgcagatttccttgga
aaagatagggagcttccaacacctgacaagggagctggtttggttgttcatgacgcaggt
gcctactgcatgagcatggcttcaacatacaatttgaagttgagaccaccagagtactgg
gtagaagaggatggttcaatcgttaaaatcaggcatgaggagaaattggacgactacatg
aggttctttgatggtcttcctgcttag
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