Phragmites australis (common reed): 133922200
Help
Entry
133922200 CDS
T10575
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
paua Phragmites australis (common reed)
Pathway
paua04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133922200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133922200
Membrane trafficking [BR:
paua04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133922200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Mo25
Motif
Other DBs
NCBI-GeneID:
133922200
NCBI-ProteinID:
XP_062223399
LinkDB
All DBs
Position
6:28483608..28491901
Genome browser
AA seq
567 aa
AA seq
DB search
MVLIPLVRDYIDRMLHDIPGMKVLVLDPQSVGMVSVVYSQSDLLRKEVFLVETVDNASSS
RESMAHLKAVYFLRPSSDNVQKLRRHLAAPRFAEYHLFFSNILKIPQIQVLADSDEQEVV
QQVQEFYADFCAIDPYHFTLNIQNNHMYMLPTLVGPPGIQSFCDRAVDGIASVFLALKRR
PIIRYQRASDAAKRIAQETARLMYDQESGLFDFRRTENSSLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIENNKVDLRGFTNVPKDQQEVVLSSIHDDFFRVNMFENFGDLGMNIKRMV
DDFQHLSKSSLNLQSIGDMAKFVTNYPEYRKAHGNVTKHVALVSEMSRIVEERKLMLVSQ
TEQELACTSGQAAAFEAVTSLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSAKYKSGLVQFLLKQAGVDKRTCDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQT
MEGIMKGRLRDADYPLVGNHFQQGRPQDVVIFIVGGTTYEEARSVALFNTANPGVRFFLG
GSAVLNSKRFLEDLGEAQRISKSSTLV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatccctctcgtccgcgactacatcgaccgcatgctccacgacatcccaggg
atgaaggtcctcgtgctcgacccccaaagcgtcgggatggtgagcgtggtgtacagccag
tcggatctgctgcgaaaggaggtgttcctcgtggagacggtcgacaacgcctccagctcc
agggagtccatggcgcacctcaaggctgtctacttcctccgaccctcctcggacaacgtc
cagaagctccgtaggcaccttgccgcgccgcgcttcgccgagtaccacctcttcttctcc
aatatactgaagattccacagattcaggtgctcgccgattctgatgagcaggaggttgtg
cagcaagttcaggagttttatgctgatttttgtgccattgacccataccatttcactctc
aacatacaaaataaccacatgtacatgcttccaactttggtcggtcctcctggtattcag
agcttctgtgatcgagctgttgatggcattgcttctgtctttttggcccttaagcgccgc
cctattattagatatcaaagggcatcagatgctgcaaaaaggattgcacaagaaactgcg
agattgatgtatgatcaggaaagtggcctgtttgactttagacgaacagaaaactcttcc
ttgttgttggtgattgacagaagggatgatcctgttacacctttacttaaccaatggacg
tatcaggcaatggttcatgagcttattggaatcgagaacaataaagtagatcttagggga
tttactaatgtccctaaagaccagcaggaggtggttctatcatcaatccacgatgatttt
tttagagttaacatgtttgagaattttggggaccttggtatgaacatcaaaagaatggta
gatgactttcagcatctttcaaagagcagcctgaatctccagagtataggtgatatggca
aaattcgtgaccaactatcctgaatatcgaaaggcacatggaaatgtaacgaaacatgtt
gctttggtaagcgagatgagcagaattgtggaggaaaggaagcttatgctagtttcacag
acagaacaagagctagcatgtacaagtggacaagcagccgcctttgaggctgtcacttcc
ttgctaaacaatgaaagtgtatctgatattgatcgcttacgactagtaatgctatatgct
ttgcggtatgaaaaagaaagtccagttcagttgatgcagcttttcaacaaattagcttct
cgttctgccaaatacaagtctgggcttgttcaattcctccttaagcaagctggtgttgat
aagagaacatgcgatttgtacgggaaccgtgacctattaaatattgctcgcaacatggct
cgtgggcttaagggagttgagaatgtgtacacccaacaccagcctcttctcttccaaacg
atggaaggaatcatgaaagggcgattacgagatgctgactatccacttgttggcaatcac
ttccagcagggcaggcctcaagatgttgtcatattcattgttggagggacaacttacgag
gaagcaagatcggtggccctttttaacacagcaaatcctggagttcgtttcttccttgga
ggttcagcggttctaaattcaaagagatttcttgaagatttgggagaggcgcaaagaata
tcgaaatcgagcactctagtatga
DBGET
integrated database retrieval system
