Phragmites australis (common reed): 133922265
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Entry
133922265 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133922265
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133922265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133922265
Enzymes [BR:
paua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
133922265
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
Other 90S particles
133922265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
133922265
NCBI-ProteinID:
XP_062223491
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All DBs
Position
6:complement(33483445..33486727)
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AA seq
282 aa
AA seq
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MGRSYAVKGRKKKRKLGDGAASDAAPTAEEAEELPLPEEAEEEKGKDEAAEGEEEQAVPE
GLPVVPRAVDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADYRPD
IIHQALLAIFDSPLTKSGRLQAVYVKTEKGVLFEIKPHVRMPRTFKRFCGLMSQLLQKLS
ITAVGKREKLLNVIKNPVTRYLPVGARKIGLSYSAEKSVNLFDYVAKSSIDETLVFVVGA
MAHGKIDKEYTDDYIQICNYPLSAACCLNRICSALEQKWNIQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggggcggtcgtacgcggtgaagggtcggaagaagaagcgcaagctcggcgacggcgcg
gcctccgacgccgcccccaccgccgaggaggcggaggagctcccgcttcctgaggaggcc
gaggaggagaagggaaaggatgaggcggcggagggggaggaggagcaagcggtgccggag
gggctcccggtcgtgccccgggcggtggacgggaagcggcgacccggtgccatcttcgtg
ctcgagagggcctgcctcgaggtcggcaaagtcggcaagactatgcaaatcttgaactca
gatgatcacgctaattatttgaggaagcagaaccgcaatcctgctgattataggcctgat
atcattcatcaggcgctactggcaatatttgatagtcctctaactaagtctggaaggtta
caagctgtttatgtgaagaccgaaaagggagtattgtttgaaatcaaacctcatgttcgc
atgccacgaacatttaaacgtttctgtggtctgatgtctcaattgttgcaaaagctgagc
attacggcagttgggaagcgtgagaaacttcttaatgttattaaaaatcctgttacccgc
tatctacctgttggtgcacggaagattggtctttcatatagcgcggagaagtcagtcaac
ttgtttgactatgttgccaaatctagtatcgatgaaacccttgtgtttgtggttggtgcc
atggcccatggaaagatcgacaaggagtacacagatgattacatacaaatttgcaattac
cctctcagtgccgcctgctgtttaaatcggatatgcagtgccctggagcagaagtggaac
atccaatga
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