Phragmites australis (common reed): 133922334
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Entry
133922334 CDS
T10575
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
paua Phragmites australis (common reed)
Pathway
paua04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133922334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
paua04040
]
133922334
Ion channels [BR:
paua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133922334
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133922334
NCBI-ProteinID:
XP_062223605
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Position
6:36235675..36250037
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AA seq
673 aa
AA seq
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MATATRSGRAGLHTHTTTASHDRAVPPTRSGETGNDLLCLASPSVRPRRRRLLPRTTPLR
SATPPIEVPPPHPLRFQDWKSEQSVGSDRVVSERGHNVFGLLRDRTAGAFSFLGNPSHPE
TLNKSASEERKSKTRILDPQGPFLQRWNKIFVVSCLIAVSVDPLFLYIPVIDGDNNCLYL
DKKLEITASILRFFTDIFYLLHIIFQFRTGFIAPSSRVFGQGVLVEDTFAITKRYLSMYF
VVDFLAVLPLPQVFVLVVLPNLQGSEVMKAKNTLLIIIICQYVPRLIRIIPLYLQITRSA
GIITETAWAGAAFNLLIYMLASHGFGALWYILSIQREDTCWRQACSNHDGCDPTSLYCGS
NIFGNNTFLQIACPTNGTANPDPNFGIFQPALNNVSQSTSFFEKLFYCFWWGLQNLSSLG
QNMKTSTNTSENLFAVFVSTSGLVLFALLIGNVQIYLQSASVRIEEMRVKRRDTEQWMAH
RLLPENLKERILRHEQYRWQETRGVDEEGLLANLPKDLRREIKRHLCLSLLMKVPMFENM
DEQLLDAMCDRLKPMLYTEGSCIIHEGDPVNEMLFIMRGTLESMTTNGGQTGFFNSNVLN
GGDFCGEELLTWALDPTSASNLPGSTRTVKTLSEVETFALRADELKFVATQFRRLHSKQL
QHTFRFYSQQFRT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggctactgctactcggtctggtcgagctggactccacacccacacgacgaccgcgtcc
cacgatcgagccgtccctccgacccggtccggggaaaccggtaacgacctcctctgcttg
gcttccccgtcggttcgtcctcgccgccgccgcctcctcccacgaactacacctcttcgg
tccgcgacgccgcccatcgaagtccccccgccccacccgctcaggtttcaggactggaaa
tcagagcaatctgttgggtcagacagggtagtttcagaaagagggcataatgtctttggc
ttgctaagggacagaactgcaggagccttttcattcctagggaacccttcacatcctgaa
actctaaacaaatcagcttcagaggaaaggaaatccaaaacaagaattcttgatcctcaa
ggcccatttctacagagatggaacaagatatttgtggtatcatgtctcattgcagtttct
gtggacccattgttcttatatatcccagtaattgatggcgacaataattgcctgtatttg
gataagaagttggaaatcacagcaagtattctgcgttttttcacagatatcttctatttg
ctccatataatatttcagttcaggacaggctttattgccccttcttctagagtgtttggt
cagggtgtcttggttgaggacacatttgcaataacaaagcggtatctatcaatgtatttt
gtggttgatttcttagctgttctacccctccctcaggtgtttgtattggtggtgctaccc
aatctccagggttccgaagttatgaaggcaaaaaatacgttactgattataattatatgt
caatatgtgcctcgactgatccgaataataccgctttaccttcaaatcacgagatcggct
ggtataattacagagacagcatgggctggtgctgcttttaaccttttaatttatatgctc
gctagtcatggctttggagctctttggtacattctttccatccaacgagaggacacctgt
tggaggcaagcatgtagtaaccatgatggctgtgatcctacatctttatattgtgggagt
aatatatttggaaataatactttcttacaaattgcttgcccaacaaatggtactgccaat
ccagacccgaactttggaatttttcaaccagctctcaataatgtttcacaatcaacgagt
ttctttgaaaaactattctattgcttttggtgggggctgcaaaatctaagctctcttggt
cagaacatgaaaacaagcactaatacatcagagaatctgtttgctgtttttgtctcgaca
tcgggtttggttttatttgcactccttattggtaatgtacagatttatttacagtcagcc
tctgtgcgcatagaagaaatgagagtgaaaaggcgtgatacagagcaatggatggcacat
aggctacttcctgagaatctcaaggaacgaatactgcgtcatgaacaatataggtggcaa
gaaacaagaggggttgatgaagagggccttcttgcaaaccttcccaaggatcttagaagg
gagataaagcggcatctttgtctgtcacttctcatgaaggttccaatgtttgaaaacatg
gatgaacagctcttggatgccatgtgtgatcgtctaaagcccatgctgtacacagaaggc
agctgtatcattcacgaaggtgatccagtgaatgaaatgctcttcatcatgagaggaact
ctcgagagtatgacaaccaatggcggacaaaccggcttcttcaactccaatgttctcaat
ggtggagacttctgtggtgaagagctcctcacatgggctcttgatcccacttcagcttcg
aaccttcctggctcaaccaggacagtaaagacgttgtcagaagttgaaacttttgctttg
agggctgatgagttgaagtttgtggccacccaattcaggcggctccacagcaaacagctc
cagcataccttcagattttactcacaacaatttagaacctag
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