Phragmites australis (common reed): 133922402
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Entry
133922402 CDS
T10575
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5 isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133922402
Enzymes [BR:
paua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
133922402
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Other ribosome biogenesis factors
133922402
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
RsmF-B_ferredox
FtsJ
PCMT
Methyltransf_31
Methyltransf_15
Methyltransf_4
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
133922402
NCBI-ProteinID:
XP_062223713
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Position
6:complement(39242390..39248040)
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AA seq
499 aa
AA seq
DB search
MPPPQPKNRSRGSAATGVNRPPPRRMASRDAAERAAFFARREAAAVLRRVLHGDAARRAA
GSIKSLVYSPTVRNKRATFALVCQTLKYLPILKEVLTSCAVLNSKWKKQVELVYVTAYDI
LFGQGITVSGSAEQLIMLHKDSLRTALDKVCARRKVSCVEDLLSEKTAVKPKPRSLRVNT
LKTTTESVIEELNKIHMVDKDDIVPDMLVLPPGTDLHNHPLVTDGKVFLQGKASCMVAVA
LCPKPGWKVIDACAAPGNKTVHLAALMNGEGSIIACELNKERAKTLQHTVRRSGANNIQT
VTGDFLDIDSNDPSYAEVRAILLDPSCSGSGISTERLDYLLPSHSRDHQDDASTSWRIQK
LSAFQRKALTHALLFPSVERVVYSTCSIHQAENEDVVNSILPLATSLGFELATPFPQWRR
RGLPVFEGSEHLLRTDPEDDMEGFFIALFVRKAVGGLVSPSEDDAVGLRRKQFHRRGNRL
RALSSLRLSRMILCPTGRL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcagcctaagaatcgcagccgcggttccgcggcgaccggagtgaaccgg
ccgcccccgcgccggatggcgagccgggacgcggcggagcgcgccgcgttcttcgcgcgg
cgcgaggcggccgcggtgctccggcgcgtgctccacggggacgctgccaggcgcgccgcg
ggctccatcaaatccctcgtctactcccccacggtccgcaacaagcgcgccaccttcgct
ctcgtctgtcagactctcaagtatcttccaattcttaaggaggttttaacatcatgtgca
gtactcaatagcaaatggaagaagcaagtggaattggtttatgtgactgcttatgacatt
ctctttggtcagggaatcacagtttctgggtcagctgagcagttaattatgctacataaa
gattctctgaggactgctcttgataaagtttgtgccagaaggaaagtcagctgtgttgaa
gatttgttaagcgagaaaacagcagtcaaaccaaagcccaggtctcttcgtgttaacact
ctcaagactactacagagtctgtcattgaagaattgaacaaaatacacatggttgataaa
gatgatatagttccagacatgttggtactcccacctggaactgatttgcataaccatcca
ttggtcacagatggaaaagtgtttttgcaggggaaagctagttgtatggtagcagtcgca
ttatgccctaagccaggctggaaggttattgatgcatgtgcggctccagggaacaaaaca
gtccaccttgctgcactcatgaatggagaggggagtattatagcttgcgaacttaacaaa
gagagggccaagacattacaacatactgtcagaagatctggagcaaataatattcaaaca
gtcactggtgactttttggatatagatagcaacgatccatcatatgctgaggtccgtgct
attctattggacccctcttgctctggttctggaatctctacagagagacttgactacttg
cttccttcacattctagagatcaccaggatgatgctagtacaagttggaggatacagaaa
ctgtccgcttttcagaggaaagctctcacacatgctctattatttccctcagtggaaaga
gttgtctacagcacatgttccatccaccaggctgagaacgaggatgtcgtgaactccatc
ctgcccttagctacatcactcggattcgagcttgcgactccgttccctcaatggcgccgc
cgtggccttcccgtttttgaaggatctgaacatttgctgcggacggatcctgaggacgac
atggaaggcttcttcattgcattgttcgtgagaaaagcagtaggcggtcttgtaagccct
agtgaagatgatgcagtaggattgagaagaaaacaatttcatagaaggggtaacaggctc
agggcgttaagctccttgagattgtccaggatgatcctctgccctaccgggcgtctctag
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