Phragmites australis (common reed): 133922418
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Entry
133922418 CDS
T10575
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133922418
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133922418
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133922418
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133922418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Clathrin
Beta-prop_WDR35_TULP_N
HEAT_GCN1
TPR_GEMI5
WD_LRWD1
TPR_8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
133922418
NCBI-ProteinID:
XP_062223733
LinkDB
All DBs
Position
6:complement(39474105..39487917)
Genome browser
AA seq
920 aa
AA seq
DB search
MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTDLPV
RSAKFIAQKQWVIAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSASDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNNFASASLDRTIKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REVPVASMDSSGKIIWAKHNEIHTVNIKSVGADNEIADGERLPLAVKELGSCDLYPQSLR
HNPNGRFVVVCGDGEFIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSRIKIYSKNFQ
EKKSIRPSFSAERIFGGVLLAMCTNDFICFYDWAECRLIRRVDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVM
RGDFDSANAILSSIPKEQYDSVARFLESRGMLEEALEIATDTNYRFDLAVNLGRLEIAKA
IAVEVQSESKWKQLGELAMSTGKLEMAEECLLHAMDLSGLLLLYSSLGDAEGIAKLASMA
KEQGKNNVAFLCFFMLGKLEESLQLLIESNRIPEAALMARSYLPSKVPEIVALWKKDLQK
VNPKAAESLADPNEYPNLFEDWQIALNVEATVALKRGIYPPAEEYMIHAERSNESLVEAF
KNMHVHEEVPDDHGNTVHEVIEDDGVEASQEDAVEVEAEDDGVEESQEDAVEVEAEGSTD
GAVLVNGNSSEEQWVLTPEQ
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccggttggacatcaagaggaagctcgcgcagaggtcggagagggtcaagtcc
gtggatctgcacccaacagagccatggattttgtcgagtctgtactcagggagcgtttgc
atctggaactaccagacgcagacgatggtgaaatcatttgaagtcacggatttaccagtt
cgttcggctaaattcattgcacaaaagcaatgggtcattgctggtgccgacgatatgttc
atccgtgtatacaattacaatacaatggataaggtcaaggtttttgaagctcatactgac
tacattaggtgtgtggctgttcatcctacccagccctttgttctgtcagcttctgatgac
atgctgattaagctatgggattgggataaaggctggatgtgtactcaaatctttgagggg
cattctcactatgtgatgcaagtcacatttaacccaaaagataccaacaattttgccagt
gcttcccttgatcgcacaataaagatatggagtcttggttctcctgaccctaacttcaca
ttagatggccattcaaaaggcgtgaactgtgttgattacttcactggtggtgatcggcca
tatttaattactggctctgatgatcagactgcaaaggtttgggactaccaaacaaagagc
tgtgttcaaacacttgaaggacatgcacataatgtctctgctgtgtgtttccatccggag
ctaccgataataattactggctcagaagatgggacagttcgcatgtggcattctactacc
tacaggcttgagaacactcttaactacggccttgagcgagtttgggctttaggatacatg
aagggttcgagaagggtcgtgattggatatgatgaagggacaataatgataaaaattgga
cgtgaagttcctgttgctagcatggacagcagtgggaaaatcatatgggcaaagcataat
gaaatccatactgttaatatcaaatctgttggtgcagacaatgagatcgcagatggtgaa
cgattaccattggctgtgaaggagttgggaagctgtgacctttacccacaaagcttaagg
cacaatccgaatgggagatttgttgttgtatgtggagatggagaattcataatatacaca
gcattagcatggagaaatagatcttttgggtccgcgcttgaattcgtttggtcaactgat
ggagaatatgctgtcagagaaagcacctcgaggataaagatatacagtaaaaatttccag
gagaagaaaagtataaggccatcattctctgcagagcgcatatttggtggagtattactg
gctatgtgtacaaatgacttcatttgcttctatgattgggcggaatgcaggttgatacgt
cgagttgatgtcaatgtgaaaaatctctactgggctgacagtggtgatttagtaacaatt
gcaagtgatacatcgttctacattttgaagtacaatagggatgtcgtttcatctcacttg
gatggagggggttcagttggtgaggaaggtgtggaagatgccttcgaactgcttcatgag
atcaatgaacgcgtccgaactgggctatgggttggcgattgtttcatctacaataattct
tcatggcgacttaattactgtgtaggaggagaggtcacgaccttgtttcacttggatcgg
ccaatgtatttattaggatatcttgcaaatcaaagtcgagtctatcttatcgataagcaa
tttaatgtcgtggggtatactttactccttagtttgatcgagtataaaacacttgtaatg
cgtggggattttgatagtgcaaatgctattttatcatctataccaaaggaacaatatgac
agtgtggcacgtttcttggaatcacggggaatgctggaggaggcccttgagatagcaaca
gacactaattacagatttgacctggctgtgaatcttggtcgactcgaaattgccaaggca
attgccgttgaggtgcaaagtgagtccaagtggaagcagttaggggagttagctatgtca
actggaaagcttgagatggcagaggagtgtcttctacatgctatggacctcagtggttta
ttgcttttgtattcatcccttggggatgctgaagggattgcaaaattagcatctatggcc
aaagaacaaggaaagaacaatgttgctttcctttgtttcttcatgctaggaaaattggaa
gaatcccttcaacttttaattgaaagcaatcgtattccggaagcagcattgatggcgaga
tcttatcttcctagcaaggtcccagagatagtagcattgtggaaaaaggatctccaaaag
gttaatccaaaagcagctgagtcgttggccgatcctaacgaatacccgaacttatttgaa
gactggcagattgctctcaatgtagaagctactgtcgccctcaaaaggggtatctatcca
ccagccgaggagtacatgattcatgctgaaaggtcaaatgagagtctagttgaagctttc
aaaaatatgcatgtacatgaagaggtaccagatgatcatggaaatactgttcacgaggtt
attgaggatgatggagtagaagcgagtcaagaagatgctgttgaggttgaggctgaggat
gatggagtagaagagagccaagaagatgctgttgaggttgaggctgaaggttcaactgat
ggtgctgtccttgtgaacggaaatagtagtgaggaacagtgggtgctgactcctgagcaa
tag
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integrated database retrieval system
