Phragmites australis (common reed): 133922448
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Entry
133922448 CDS
T10575
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
paua Phragmites australis (common reed)
Pathway
paua03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133922448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
paua03051
]
133922448
Proteasome [BR:
paua03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133922448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
RuvB_N
AAA_5
PRS7_OB
AAA_22
nSTAND3
DUF815
TIP49
AAA_7
Prot_ATP_ID_OB_N
AAA_14
Parvo_NS1
RNA_helicase
Mg_chelatase
Sec8_N
AAA_33
Sigma54_activat
AAA_3
NACHT
AAA_28
AAA_18
AAA_24
IstB_IS21
NPHP3_N
TsaE
ABC_tran
bpMoxR
ATPase
AAA_lid_PRS2_C
AAA_25
AAA_11
NB-ARC
ATPase_2
eIF-1a
PhoH
ResIII
Motif
Other DBs
NCBI-GeneID:
133922448
NCBI-ProteinID:
XP_062223782
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Position
6:40190056..40194927
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AA seq
400 aa
AA seq
DB search
MADGEDAATARRRAAIADYRKKMLNCRELESRVSTVRESLKNAKRDFTKTEDDLKSLQSV
GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR
EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY
GPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYAREHQPCIIFMD
EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPG
RLDRKIEIPLPNEQGRMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMA
AIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSTDFGKE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggggaggacgccgccaccgcgcgccgccgcgccgccatcgccgactaccgc
aagaagatgctcaactgcagggagctcgagtcgcgcgtcagcaccgtgagggaaagccta
aaaaatgctaagagggacttcacaaagactgaagatgacttgaagtctctgcaaagtgtg
ggacaaattattggagaggttctgcgccctcttgataatgaacgttttattgttaaggct
agcagtggtccacgatacgttgttggttgccgaagtaaagtggacaaggagaagttaact
tctggaacacgtgttgtacttgacatgacgaccttgacaatcatgcgcactctgccacgg
gaggtggaccctgtggtgtataacatgctgcatgaggacccgggaaatgtcagttactct
gccgtaggcgggttgtctgatcagattagggaactcagggagtccattgagttgcctctt
atgaaccctgaactctttcttcgagtgggaatcaagcctcctaagggcgttctactatac
ggtcctccaggaactgggaagacactactggcgagggctatcgctagtaacattgatgcc
aactttttgaagattgtgtcaagtgctataattgacaagtacattggagaaagtgctcgt
ttgattagggaaatgtttggctacgcgcgtgagcaccaaccatgtattatcttcatggat
gaaattgatgccattggtggccgaagatttagtgagggaactagtgctgatcgtgagatc
cagcggacattgatggagctccttaaccagttagatggatttgatgagcttgggaaggta
aagatgatcatggcaactaaccgacctgatgttcttgacccggcactcctgcgtcctgga
cgcctagacaggaagattgagattccactacccaacgagcaaggaagaatggaagtcctg
aaaattcatgcagctggtatcgccaagcatggggaaattgattatgaagccgtcgtgaaa
ttagctgaaggtttcaacggggctgatctccggaatgtctgtactgaagctggtatggct
gcaattcgtgcagagagggactatgtagttcatgaagacttcatgaaggctgtgaggaag
ctaaatgatgcaaagaagctggaatccagtgcgcactacagcacagactttggcaaagag
taa
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