KEGG   Phragmites australis (common reed): 133922751
Entry
133922751         CDS       T10575                                 
Name
(RefSeq) LOW QUALITY PROTEIN: target of rapamycin complex subunit LST8-like
  KO
K08266  target of rapamycin complex subunit LST8
Organism
paua  Phragmites australis (common reed)
Pathway
paua04136  Autophagy - other
paua04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:paua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    133922751
   04136 Autophagy - other
    133922751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133922751
Membrane trafficking [BR:paua04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    133922751
   mTORC2 complex
    133922751
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF4 ANAPC4_WD40 CFAP251_N ASA1 Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_Vps41 NBCH_WD40 Beta-prop_Aladin WD40_RFWD3 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_RIG_2nd Beta-prop_IFT140_2nd Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_DCAF12 SHKBP1_KCTD3_C Beta-prop_SPT8 PROPPIN Beta-prop_IP5PC_F PAC11 CFAP43_N Beta-prop_WDR19_2nd Beta-prop_WDR35_TULP_N KH_YLL032C_5th-like
Other DBs
NCBI-GeneID: 133922751
NCBI-ProteinID: XP_062224202
LinkDB
Position
6:complement(44126919..44131789)
AA seq 315 aa
MAQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRFLAAAGNPHIRL
FDVNSNSPQPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRA
AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA
NNRGTCYVWRLLKGTQTITCFEPLHKLQAHDEYILKCLLSPEFCDPNRYLATASSDHTVK
IWNVDGFKLERTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTXDIRVYQGHHKA
TVCCALHDGAESAPS
NT seq 948 nt   +upstreamnt  +downstreamnt
atggctcaaccttctgtcattctagcaactgcaagttatgatcacacaatcagattttgg
gaagccaagagcggtcgctgctatcgcactattcaatatccagactctcaagttaatcgc
cttgagataaccccggacaagcgattcttagctgctgctggcaatcctcatatccgcctt
tttgatgttaactcaaatagcccgcaaccggtaattagctatgattcacatactagtaat
gtgatggctgtggggttccattgtgatggtaactggatgtactcaggttctgaggatggt
actgttagaatctgggatttacggactgccacttgtcagagagaatatgaaagtcgtgca
gctgtcaacacagtagtcctacacccaaatcagaaagagctaatatctggtgatcagaat
gggaacatacgcgtgtgggatttggctgctaactcatgcagttgtgaattggtaccagag
gttgatactgctgtaagatctctaacagtcatgtgggacgggagtatggtggttgctgcg
aataaccgtgggacatgctatgtttggcgcctgcttaagggtacccagacaattacctgc
tttgaacctctccacaaattgcaagctcatgatgagtacattctgaaatgcttgctttca
ccagaattttgcgaccctaacaggtatcttgccacagcatcatctgaccacactgtaaag
atttggaatgttgatggcttcaagttggaaagaactttagtgggccatcaacgctgggtt
tgggactgtgtgttctcagtagatggcgcttacctgataaccgcttcttctgataccacc
gcgagattatggacaatgtcgactnnggacatcagggtgtaccagggacaccacaaggca
accgtatgctgtgctctccatgatggagccgagtcagcgccctcataa

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