Phragmites australis (common reed): 133922823
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Entry
133922823 CDS
T10575
Name
(RefSeq) autophagy protein 5-like isoform X1
KO
K08339
autophagy-related protein 5
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133922823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133922823
03029 Mitochondrial biogenesis [BR:
paua03029
]
133922823
Membrane trafficking [BR:
paua04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133922823
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133922823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Adeno_PX
Motif
Other DBs
NCBI-GeneID:
133922823
NCBI-ProteinID:
XP_062224305
LinkDB
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Position
6:44813212..44816391
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AA seq
371 aa
AA seq
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MAAPYDEAAWSEEAARRVWGGAVPLQVHLHDADVTALPPPPPFPTLGPRIGYLPLLIPVI
KAHFSNTLPPGVDTVWFEYKGLPLKWYVPIGVLFDLLCADPERPWNLIVHFRGYPSEILS
PCEGEDSVKWTYMNSLKEATFIITGNSKSVMNMSQADQIALWESVMKVNLDGYKNVSTRL
KLGPFEEDGLVQTPSVERQQSSDEPESPGSGKPCRVPVRLYVRSVQEDLEDIEDAIPLSD
WESVSYINRPFEIRKVEGRSYITLEHALQTLLPEFFSSKPAIRADDSQHVEALDSPPDDS
DITNSSRSSQEVEQASVSLREADIAKKAKVKLVRVQGIELDMDIPFLWVANNLKNPEYYL
HISVYVGKRKQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccgtacgacgaggcggcgtggtcggaggaggcggcgcggcgggtctggggc
ggggccgttccgctgcaggtccacctccacgacgccgacgtcaccgcgctccccccgcct
ccgcccttcccgactttggggccaagaattgggtatctgcccctcttgatacctgttata
aaggctcatttcagcaacaccctcccacctggtgtggacactgtttggtttgaatataaa
gggctgccactaaaatggtatgtacctattggagttctttttgaccttctatgtgcagat
ccagaaagaccatggaatctaatagttcattttagggggtatccctcagaaattttatca
ccatgtgagggtgaagatagtgtgaaatggacctacatgaattccctgaaagaggccacc
ttcatcattactgggaacagtaagagtgtgatgaatatgtcccaggctgatcaaattgcc
ctgtgggaatctgtaatgaaagttaacttagatggatataagaatgtctcaaccaggctt
aagcttggaccatttgaagaggatggcttagtacaaactccttccgtagagcgtcaacaa
agttctgatgagcctgaatctcctggatctggcaaaccatgcagggtccctgttcgatta
tatgtgcgcagtgttcaagaagaccttgaagatatagaagatgcaatacctcttagtgac
tgggaaagcgtgtcctatataaatcggccattcgagattcggaaggttgaaggtagaagc
tacattaccctggaacatgcgttgcaaacattgcttcctgaattcttcagctcaaagccc
gcaattagagctgatgattctcaacatgtggaggcattggattcacctcctgatgattca
gatatcactaactcttcaagaagttctcaggaggtggaacaagcttcggtaagtttgcgg
gaggcagatattgccaagaaagctaaagtgaagctagtaagggtgcagggcatagagctc
gacatggacatcccgttcctctgggttgccaataacttgaagaaccctgaatactacctc
cacatttctgtatatgtcggtaaaagaaaacaatag
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