Phragmites australis (common reed): 133923882
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Entry
133923882 CDS
T10575
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00040
Pentose and glucuronate interconversions
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133923882
Enzymes [BR:
paua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133923882
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
133923882
NCBI-ProteinID:
XP_062225150
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Position
7:3167372..3172337
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AA seq
466 aa
AA seq
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MAEAASASARRRRAGLAAALLLVLVLAAGSVALGGGTGGRLLDGLRHRSTAAAARRWLRD
SSWPAATTLRDGDDDGAMARTVAGAVGDPETVVSQVHMSIKNSTARRNLGYLSCGTGNPI
DDCWRCDPDWHNNRQRLADCGIGFGRNAIGGRDGKIYVVTDPGDDDPVNPREGTLRYAVI
QDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYITNVIIHGLHIH
DCKPTGNAMVRSSPSHYGWRTMADGDAVSIFGSSHIWVDHCSLSNCADGLVDAIMGSTAI
TVSNNYFTQHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDY
THWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETASSVWKSWNWRSEGDLLLNG
AYFTPSGAGASASYSRASSLGAKSSSMVDSITSGAGALSCRKGAAC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcttctgcgtcggcgaggaggaggcgcgccgggctcgcggcggcgctg
ctcctcgtcctcgtgctggccgccggcagcgtggcgctcgggggcggcaccggcgggcgg
ctcctcgacgggctccggcaccggagtacggccgcggcggcgaggcggtggctgcgggac
tcttcatggccggcggcgacgacgcttagggacggtgacgacgacggggcgatggcgagg
accgttgccggcgcggtgggcgacccggaaacggtggtcagccaagtgcacatgtccatc
aagaacagcacagcccggcggaacctcgggtacctgtcgtgtgggacgggcaacccgatc
gacgactgctggcgctgcgacccggactggcacaacaaccgccagcgcctcgccgactgc
ggcatcggcttcggccgcaacgctattggcggccgcgacggcaagatctacgtggtcacc
gatcccggcgacgacgaccccgtcaacccgcgcgaaggcaccctccgctacgccgtcatc
caggacgagccgctctggatcatcttcaagcgcgacatggtcatcacgctcaagcaggag
ctcatcatgaacagcttcaagaccatcgacggccgcggcgccaacgtgcacatcgccaac
ggcgcctgcatcaccatccagtacatcaccaacgtcatcatccacggactgcacatccac
gactgcaagcccacagggaacgccatggtgcgcagctcgcccagccactacgggtggcgc
accatggccgacggggacgccgtgtccatctttggctccagccacatctgggtggaccac
tgctcgctctccaactgcgccgacggactggtcgatgccatcatgggatccacggccatc
acagtgtccaacaactacttcacccagcacaatgaggtgatgctccttggccacagtgac
tcctatgtgaaggacaaggcgatgcaggtgacaatagccttcaaccatttcggcgaaggt
ctcattcagagaatgccaaggtgcaggcatggttacttccatgtggtgaacaatgactac
acccactgggaaatgtatgctattggcgggagcgctgagccaaccatcaacagccagggc
aaccgctaccttgccccgacaaaccccttcgccaaggaggttactaagagagtcgaaacc
gcttcgagtgtctggaagagctggaactggagatcagagggtgacctactgctcaatggc
gcctacttcaccccatctggcgcgggcgcctcagccagctactcacgcgcctccagcctc
ggtgccaagtcatcatccatggttgactccatcacctccggcgctggcgccctgtcgtgc
cgcaaaggcgcggcctgctag
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