Phragmites australis (common reed): 133923920
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Entry
133923920 CDS
T10575
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133923920
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133923920
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133923920
Membrane trafficking [BR:
paua04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
133923920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
DUF7791
Motif
Other DBs
NCBI-GeneID:
133923920
NCBI-ProteinID:
XP_062225215
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Position
7:complement(6197597..6215084)
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AA seq
982 aa
AA seq
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MASRPPLRTASAASYSSTDSPTSAGPPGGVPQSITALLNNPLTSAASSYWLPWPPPTPLT
DAVPPPPSHPCEVTRADFAPYLAAVSEPLARFADIRLHANAELAASDDASAAPASSGLAA
CLREVPALFFKEDFALEDGPTFRAACPLDDDGLQERLGQHLDVVEQHLVREIALRSESFY
EAQGRLRALDGEIVTAVGRIRDLREVVRVLTGGLVGAARQVQELNATRGNLVALQQKLTV
ILYVSQALAALKLLVAAADCAGALDVIDDLQNLLDTDELTGLYCFRNIRDQLGTSLDSVY
SILSAEFVHAAVPDGKAVDAMILSNVKRKASSPLNGIEHEVNIDEEERFVLRDRLLPLII
CLLRTDKLPAVLRIYRDTLITVMKASIKATVADLLPVLTARPIDSDSVTGDRAADSDAGG
QSLANKLRSLSSEGFVQLLSAIFRIVQIHLLQAAEVKRIVEWIMGNLDVSNPTLQHGGSA
VSDISQENDYSVSSRVSNTLTRSTSKIPLVQGKANDLSITNSIKNVRADVLRENTEAVFA
ACDAAHGRWAKLLGVRAALHPKLRLQEFLIIYNITEEFIASTEKIGGRLGYNIRGILQQQ
SKQFVDHQHSVRMTKIKAVLDQETWVLVDVPEEFQAIVLSLSSTYSSVNGMGMPSTDDNS
KFNDHGPTSQELACSAENNADNGKVTSVTGHESKIESTSLQTENSVVGNARSTSQTIVHG
GVGYHMVNCGLILLKMLSEYVDISKCLPSLSFEVVQRVVEILKLFNTRTCQLVLGAGAMQ
VSGLKSITSKHLALASQIISFIYSLIPDIRRVLFLKIPEARKQLLMSELDRVTQDYKIHR
DEIHSKLVQIMRERLLANLRKLPQILEGWNGPEDNDLQPSPFAKAVTKEVTYLHRILSQT
LLEVDVQTIFRQVVQIFHSHITEAFSKLEVSTQAKNRLCRDIQHILACIRKLPTENFSAE
TIQNYGLLDEFLAENFGTKVDE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcccgcccctccgcaccgcctccgccgcatcctactcctccaccgactcc
cccacctccgctggaccccccggcggcgttccgcagtccatcaccgcgctcctcaacaac
cctctcacctccgccgcctcctcctactggctgccctggccgcccccgaccccactcacc
gacgcggttcccccgccgccgtcgcacccctgcgaggtcacccgcgccgacttcgcgccc
tacctcgccgcggtctccgaacccttagcgcgcttcgccgacatccgcctccacgccaac
gccgagctcgccgcctccgacgacgcctccgccgcacccgcgtcctccggcctcgccgca
tgcctccgcgaggtccccgcactcttcttcaaggaggacttcgcgctcgaggatgggccc
accttcagggccgcgtgcccgctcgacgacgacgggctgcaggagcgcctcggccagcac
ctcgacgttgtggagcagcacctcgtgcgggagatcgcgctgcggtccgagtccttctac
gaggcgcagggccggctgcgcgcgctcgacggggagattgttacggcggtagggaggatc
cgcgacctcagggaggtggtccgggtgctcacggggggccttgttggggcagcgcggcag
gtgcaggaactcaatgcgacgaggggcaaccttgtcgccctgcagcagaagctcactgtc
atcctctacgtcagccaggcgctcgcagcgctcaagctgcttgttgcagcagcagactgt
gctggtgcccttgatgtcatcgatgacttgcaaaatttgctggatacagatgaacttact
ggtctttattgctttcgaaatattcgagatcagctgggaacatcactagattcagtgtac
agcattctttcagcagaatttgtgcacgctgctgttcctgatggaaaagctgtagatgca
atgattttatcaaatgtcaaaagaaaagcttccagcccactgaatgggatagagcatgag
gtaaacattgacgaggaggaaagatttgttcttagagatcgactcctccccctcattatt
tgcctgctgagaacggacaaacttcctgcagttctcagaatttaccgggatacgcttatc
actgttatgaaagcttcaatcaaagccactgtagcagatttgcttccagttttaactgcc
agaccaatagattctgattcagtaactggagacagagctgccgattctgatgctggaggc
cagtccctagcaaataagttgcgaagtctgtcatctgaagggtttgttcaacttttatca
gctatttttaggatagtacagatacatttactgcaagcagctgaagtgaaaagaatagtt
gagtggatcatgggaaaccttgatgttagtaatcctacgcttcaacatggtggttcagct
gtttctgatatttcccaagagaatgactatagtgtttcttcacgggtctctaatactctt
acacggagtacttccaagatcccattggtccaaggaaaagcaaatgatttatccattaca
aattcaataaagaatgtccgggctgatgtcttgagagaaaacaccgaagcagtttttgcc
gcatgtgatgctgcccatgggcgatgggctaagctgctgggtgtccgtgctgctctacat
cccaagttaaggctccaggagttcttgatcatctacaatataacagaagagtttatagct
tctactgaaaagattggaggcaggttgggttacaacattcgtggaatcctacagcaacaa
tcaaaacaattcgttgatcatcagcatagtgttcggatgacaaaaatcaaggcagttctt
gaccaagagacgtgggttcttgttgatgttccggaagagttccaagcaattgttctttca
ctgtcatccacctattcttctgttaacggcatggggatgcctagcactgatgataactct
aagttcaatgatcatgggcctacaagtcaagaactggcatgttcagctgaaaataatgct
gataatggcaaagtaacatctgtgacaggccatgaaagcaagattgagtccacttctctt
cagactgaaaatagtgttgttgggaatgccaggtcaacctcgcagaccattgtacatgga
ggtgttggctatcatatggtaaactgtggtttgatattgttgaagatgttatcagaatat
gttgacattagtaaatgtttaccatcattatcttttgaggtggtccaacgtgttgtggaa
atactgaagcttttcaacactaggacttgccaacttgttcttggtgcaggcgccatgcag
gtttctggtcttaaatcaattacttctaagcatttagctttggcgagccaaattattagc
tttatatattcgttaattccagatatcaggcgagtacttttcctgaaaatacctgaagca
cgcaaacagctgttaatgtctgaactggatagagtcactcaggattacaagattcatcga
gatgaaattcacagcaagcttgtccagataatgagagagagattgctagcaaatcttaga
aaattaccccaaattctggagggttggaatggaccagaggataatgatttgcagccaagt
ccatttgctaaagccgttacaaaggaagtaacttatttgcatcgcatcctttctcaaaca
ttgcttgaggttgatgtgcaaacaatattcaggcaagtagttcaaatattccattcacat
attacagaagcattttcaaaattggaagttagtactcaggcaaagaacagattgtgccga
gatattcagcatattcttgcatgtatccggaagttgcctactgagaatttcagtgcagaa
actattcaaaattatggtcttcttgatgaattcttggctgagaactttgggacgaaagtt
gatgaatga
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