Phragmites australis (common reed): 133923939
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Entry
133923939 CDS
T10575
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133923939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133923939
03110 Chaperones and folding catalysts [BR:
paua03110
]
133923939
03029 Mitochondrial biogenesis [BR:
paua03029
]
133923939
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133923939
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133923939
Messenger RNA biogenesis [BR:
paua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133923939
Chaperones and folding catalysts [BR:
paua03110
]
Heat shock proteins
HSP60 / Chaperonin
133923939
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133923939
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133923939
Exosomal proteins of other body fluids (saliva and urine)
133923939
Exosomal proteins of breast cancer cells
133923939
Exosomal proteins of colorectal cancer cells
133923939
Exosomal proteins of bladder cancer cells
133923939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-GeneID:
133923939
NCBI-ProteinID:
XP_062225233
LinkDB
All DBs
Position
7:complement(7765851..7771655)
Genome browser
AA seq
577 aa
AA seq
DB search
MASANAISTASLLRPLFQGRTRRARNGRSQRFVVRADAKDIAFDQKSRAALQAGVEKLAN
AVGVTLGPRGRNVVLDEYGAPKVINDGVTIARAIELYDPMENAGAALIREVASKTNDSAG
DGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLIEELENKARPVKGRGDIKA
VASISAGNDEFIGSMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVT
NLEKSIVEFENAKVLITDQKITSIKEIIPLLEKTTQLRAPLFIIAEDITGEALATLVVNK
LRGIINVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATVEQLGTARKVTIH
QTTTTLIADAASKDEIQARVAQLKKELAETDLIYDSQKLSERIAKLSGGVAVIKVGATTE
TELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTLVPAIKEKIEDPDERLGADIIQ
KALVSPAALIANNAGVEGEVVVEKIKDGEWEVGYNAMTDKYENLIEAGVIDPAKVTRCAL
QNAASVAGMVLTTQAIVVEKPKPKPKVVEPAEGTLTV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccaacgccatctctactgcctccctcctccgccccctctttcaggggagg
acgaggagggccaggaacggccggtcgcagcggttcgtggtgcgtgcggacgcgaaggac
atcgccttcgaccagaagtcccgggcggcgctccaggccggcgtcgagaagctcgccaac
gccgtgggcgtcacgctcgggccccgagggaggaatgtagtgctggatgagtacggtgct
cccaaagttataaatgatggagtcactattgcccgggctattgagctgtatgatcccatg
gaaaatgctggcgcggcattgattcgtgaggttgctagcaaaaccaatgattctgctggt
gatggaactacaactgcttctgtccttgctcgagaaataatcaagctgggccttttgagt
gtaacttctggtgcaaaccctgtatcacttaagaagggaatagacaaaactgtacagggt
ctaattgaggagctggagaacaaggctagaccagtgaagggccgtggtgatatcaaagct
gttgcctctatctctgctggcaatgatgagttcattggatccatgattgccgatgctatt
gataaagttggcccagatggtgtcctttctattgagtcttcatcatcttttgagacaacc
gttgaagttgaagaaggaatggagattgaccgtggatacatatccccacaatttgtgaca
aaccttgagaaatcgattgtggagtttgagaatgctaaggttcttattactgatcagaag
atcacaagcataaaggaaattattccacttctggagaagaccacgcagctgagagccccg
ctgttcattattgctgaggacattactggtgaagctttggcaactcttgtagtaaacaag
cttcggggaattattaatgttgcagcgatcaaagccccaagctttggtgagcggcggaag
gctgtccttcaggatattgccattgttacaggggctgaattcctagcaaaagatcttggt
ttgttggttgagaatgctacagtagagcaacttgggacagcaaggaaagtcacaatacat
cagactacaacgaccctcatagcagatgctgctagcaaagatgagatccaggcgagggtt
gcacagctaaagaaggagcttgctgaaactgatttgatatatgattcccagaaattgtct
gagagaattgcaaagctttctggtggtgttgctgttatcaaggttggagctacaactgag
actgagcttgaggaccgccagctacgtattgaggatgcaaaaaatgccacttttgcagct
attgaggagggcattgttcctggaggtggtacagcatatgtgcacctgtctactcttgtc
cctgcgatcaaagaaaaaattgaagaccctgatgagcgccttggtgctgacattattcaa
aaggcattggtatcacctgctgcactgatcgcaaacaatgctggagtcgaaggggaagtg
gttgttgagaagatcaaggacggtgagtgggaagtgggctacaatgcaatgacagataag
tacgagaacctgatcgaggctggtgtgattgaccctgcaaaggtgactaggtgcgcactc
cagaatgccgcctcagttgctggaatggtcctaaccacacaggcaattgttgttgagaag
ccgaagccaaagccgaaggtggtcgagccagcagagggaacccttaccgtgtaa
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