Phragmites australis (common reed): 133924031
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Entry
133924031 CDS
T10575
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133924031
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
133924031
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
NRBF2_MIT
TPR_14
Motif
Other DBs
NCBI-GeneID:
133924031
NCBI-ProteinID:
XP_062225380
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Position
7:16183799..16192204
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AA seq
723 aa
AA seq
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MSEPSASAAVDGLLALAEEAERRRDFSAAASCLESALRPPHAAALLPLAEARARLRLASL
LLDRRAATAAKGHLERALLLLSPLPSAPPRLKLLAHSHLAGAYAVLGAVPSQKHVLRRGL
GLLASASASGLLPRAPALLWTCNFQAQLASALAIDGDAASALSTLSAGGAAAAELQSPQL
ELFFAATELHVHLLCWEDSAAVEGAVARVTQLWDTLPAEQKEHWVGLFFYTELLRTFYLL
RICDYKRASQRVELLDTAVKREMQRGQHIKGLASELTAVERTLGQPGLKERERSALAHKQ
RQLKAQLRTLCGYDSLNDVLDYGDKLLLAPPPMHGEWLPRTAVFVLVDLMVVMVGRPKGI
FKECGKRIDSGLQLIHDELLKLGIMDGVTEANLEHSTIWTAGLYLMLLLQFLENKVAVEL
TRSEFVEAQEALAQMKNWFTRFPTILQGCESTIEMLRGQYAHSVGCFDEAAFHFLEAMKL
TESKSMQSMCQVYAAVSYICKGDAESSSQALELVGPAYRTMDSFVGVREKTCIIFVYGLL
LMRQHNPQEARNRLASGLRIAHQQLGNIQLVSQYLTILGTLALQLHDAGQAREILKSALT
LAKTLYDIPAQMWILSVFTELYRELEEKGNEMENSEYERKKEDDLQRRLSEAHSHAFHQE
LVEKSRIQIQPLRDLSRNQPEMGASMANTDLDIPESVGLSAPQPSSAKRLVEPTRRSARR
RQS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccgtccgcgtcggcggcggtggacgggctcctcgcgctggcggaggaggcc
gagcgccggcgcgacttctcggccgccgcctcttgcctcgagtccgcgctgcgccctccc
cacgccgcagcactcctcccactcgccgaggcccgcgcgcgactccgcctcgcctcgctc
ctcctcgaccgccgcgccgccaccgccgccaaggggcacctcgagcgcgcgctcctcctc
ctctcgccgctcccgtccgcgccgccgcggctcaagctgctggcccactcccacctcgcg
ggcgcctacgcggtcctcggcgccgtaccgtcgcagaagcacgtgcttcgccgcgggctc
ggcctcctcgcctccgcgtccgcctctgggctcctcccccgcgcccccgcgctgctttgg
acgtgcaacttccaggcgcagctcgcgtccgcgctcgccatcgacggggacgccgcgtcc
gcgctctccaccctgtccgcggggggagccgccgccgcggagctccagagcccccagctc
gagctcttcttcgccgccaccgagctccacgtccacctcctctgctgggaggacagcgcc
gcggttgagggcgccgtcgcgcgcgtcacgcagctctgggacacactcccggccgagcag
aaggagcactgggttgggctgttcttctacacagagctgctgcggaccttctacctgttg
aggatctgtgactacaagcgcgcctcacagcgcgtagagctgctggacacagctgtgaag
agagagatgcagagaggccagcacattaaggggcttgcaagtgagctcaccgcagtggag
aggactctaggtcagcctgggttgaaagagcgggagaggtcggcactggcacacaagcag
aggcagctgaaggctcagttgcggacactgtgtggctatgactcattgaacgatgtgctg
gattatggagataagttgcttttggcgccaccgccgatgcatggggagtggctcccgcgg
actgcggtgtttgtgcttgtagatctcatggtcgtcatggtgggtcgtcctaaagggata
tttaaggaatgtgggaagagaatagattcaggactgcagctcatccatgatgaactcttg
aagcttggcatcatggatggtgtgacagaggcaaatttggaacactcaacaatatggaca
gctgggctgtacttgatgcttttacttcaatttctggaaaacaaagttgctgtggaactc
acaagatcagaatttgttgaagcacaagaggctttagcacagatgaaaaactggtttact
cgtttcccaacaattctccaaggttgtgaaagcaccattgaaatgttaaggggacaatat
gcacattctgttggctgctttgatgaggctgctttccacttccttgaagcaatgaagctg
acagagagcaaatcaatgcaatcaatgtgccaagtctatgcagcagtgtcatacatttgt
aagggtgacgcagaatcttcttcacaggcactagaattggttggtcccgcttatagaaca
atggactcatttgttggcgtacgagagaagacttgtatcatttttgtttatggactttta
cttatgagacagcataatccacaagaagctcggaatcgccttgcaagtggtttgagaata
gcacaccaacagttgggtaacatccaattggtttctcagtatttaacaatactggggaca
ttagcacttcagctacatgatgcgggacaggctagagagatcctgaagtcagcattgacc
ttggcaaagacgctatatgacattccagcacagatgtggatcttgtcagtatttacagag
ttatatcgagaattggaagagaagggaaatgaaatggagaactctgagtatgaaaggaag
aaagaagatgatctgcagagaagactttctgaagctcattctcatgcttttcaccaggag
ctggtggagaaatcaagaatccagattcagccgctgcgtgacttatcaaggaaccagccg
gagatgggtgcctcaatggcgaacactgatcttgacatcccagaatcggtggggctctcg
gctcctcagccttcatctgccaaaaggctggtcgagccaacgaggcgcagtgccaggagg
aggcagtcttga
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