Phragmites australis (common reed): 133924079
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Entry
133924079 CDS
T10575
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
paua Phragmites australis (common reed)
Pathway
paua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133924079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133924079
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
133924079
Hops complex
133924079
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
Mso1_Sec1_bdg
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
133924079
NCBI-ProteinID:
XP_062225437
LinkDB
All DBs
Position
7:18387562..18394432
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AA seq
959 aa
AA seq
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MYQWRKFEFFEEKATGRGGGGGAGAAVPTEIAGRVTCCSGGRGRVAVGCDDGTVGLLDRG
FRLSYGFQAYASSVLFLQQLKQRNVLVTVGDDDQSSSQSSAICLKVFDLDKVQEEGSSTA
SPFCVKILRIFTDQFPQAKITSFMVLEEAPPVLMITIGLDNGFIYCIKGDIARERITRFK
LQVEIASDGSTSLPITGLGFRVEGQAHQLFSVTPNSVTLFSLHVQPPRRQTLDQIGSHTN
AVAMSDRMDLIIGRPEAVYFYEVDGRGPCWAFDGEKKLVGWFRGYLLCIIEDQRTQKSTL
NVYDLKNRLIAHSMPVGDVSHLVSEWGYIILIMSDKKILCIGEKDMESKLDMLFKKNLYT
VAINLVQSQQADPASTAEVLRKYGDHLYGKQEYDEAMSQYIHTIGHLEPSYVIQKFLEAK
RIYNLTNYLEKLHDRGLASKDHTTLLLNCYTKLKDVEKLNHFIKDEDGVGEIKFDVETAI
RVCRTAGYHEHAMFVAKKAGRHELYLKILLEDLGRYDEALQYISGLEANQAGLTVKEYGK
ILVEYRPAETVKILLRLCTDGGDSTTRRGSNSMHLLTIPSPMDFVNIFVHSPQYLMEFLE
NYIKTVKDSPTQTEIHNTLLELYISKDLSFPSISQENGFQNHNIKETKGKETANGYKSGT
REKTNLGKEDTKMAKNIADSRRKGLALLKSAWTSEMEDPLYDVDLALILCNTNAFKDGLL
FLYEKLKLYKEVISCYKQTHDHEGLIACCKKLGDSSQGGDPSLWGDLLNYFGELGEDCSK
EVKEVLTYIEKEDVVPPIVVLQTLSKNPYLTLSVVKDYIARKLEQESKLIEDDRKFIDKY
QEETKLMKREIEDLKTNAKVFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPE
CAPEYRSVMEAKQKLEQNARDHDLFFQQLRGSKDGFSVIADYFSKGIVSKTTIPPENGR
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggcgcaagttcgagttcttcgaggagaaggcgaccggccgaggcggcgga
ggtggcgcgggggccgccgtgccgaccgagattgcgggccgcgtgacctgctgctcgggc
ggccgcggccgcgtcgcggtggggtgcgacgacggcactgtcgggcttctcgaccgcggg
ttccgcctctcctacggcttccaggcctacgcctcctccgtcctcttcctacagcagctc
aagcaaagaaatgttcttgttacggttggagatgatgatcagtcatcttcgcagtcatcg
gcaatctgtctaaaggtttttgaccttgataaagtacaagaagagggatcaagtacagca
agtcctttctgtgttaaaattttgcggatcttcactgaccaatttcctcaggcaaagatc
acatcatttatggttctagaagaagccccgcctgtactgatgatcaccattggactggac
aatggtttcatttattgcatcaaaggtgacatcgcacgggagcgtattacacgtttcaag
ttgcaagttgagattgcttcagatggcagcacaagtttacccattactggtcttggtttc
cgagttgaggggcaagcacatcagctcttttctgtaactcctaattctgtaaccttgttc
agcttgcatgttcaaccaccaaggaggcaaacacttgatcagattggtagtcacaccaat
gctgtggcaatgagtgaccgtatggatctaattattggtagacctgaagctgtgtatttc
tatgaagttgatggtagaggtccttgctgggcttttgatggtgagaaaaagcttgtaggt
tggtttcgaggctatttgctttgcattatcgaggatcagaggacccagaagagtactcta
aatgtttatgatcttaagaatcggttgattgcacatagcatgcctgtgggggatgtttca
cacttggtttctgagtggggttacattattctcataatgagcgacaaaaagattctgtgc
attggagagaaagacatggaaagtaagcttgacatgttgttcaagaaaaatctttataca
gttgcaatcaatcttgtacaaagtcagcaggctgatcctgcttcaactgctgaggtgctg
cggaagtatggtgaccatctgtatgggaaacaggagtatgatgaggctatgtcccaatat
atccatactattggtcatcttgaaccgtcatatgttatacagaagttccttgaggcaaag
cgcatctacaacctgacaaattatttagagaagttacatgacagagggttagcatccaaa
gaccacaccacccttctgttgaactgctataccaaattgaaagatgtggagaaacttaac
catttcatcaaagatgaagatggggtaggtgaaatcaagtttgatgtggaaactgccata
agagtatgtcgtacagctggataccatgaacatgctatgtttgtggcgaaaaaggctggg
aggcatgagttgtatttgaagattttacttgaggatcttggtagatatgatgaggcactg
caatatatatccggccttgaggcaaaccaagcaggtcttaccgtaaaagaatatgggaaa
attcttgtggagtatagacctgctgaaacagtcaaaatactgttaaggctctgtactgat
ggtggagattctacgacaagaagaggttcaaacagcatgcacttacttacgataccttcg
ccaatggactttgtgaatatatttgtgcacagcccacaatatctgatggaatttctagag
aattatatcaaaacagtcaaggactcacctactcaaacagaaattcataacacccttctg
gagctctatatctcaaaagatttaagcttcccatctatatcacaagaaaatggctttcag
aatcacaatatcaaagaaacaaaaggtaaagaaactgcaaatggttataaatcaggcaca
agggagaaaacaaatcttggaaaagaagatactaaaatggcaaagaatattgccgatagc
cgaaggaaagggcttgcattgctcaaatctgcttggacatctgagatggaagatcctttg
tatgatgttgatcttgctcttattctttgtaatacaaatgcattcaaagatggattgctc
tttttgtatgagaaattaaaactttacaaagaagttattagttgttacaagcaaactcac
gatcatgaaggtttaattgcatgctgcaagaagttgggggactcatctcaaggaggggat
ccgtctctctggggtgatctgttgaactattttggggaacttggggaagattgctctaaa
gaagttaaagaggtcttgacctacattgagaaagaggatgttgtgcctcccattgttgtg
ctacagacactatcaaaaaacccatacttgacgctctcagttgtcaaggattacattgct
cgcaaacttgagcaagaatcaaagctaattgaagatgatagaaaatttattgacaagtac
caggaggaaacaaagttgatgaaaagggagatagaagatctcaagacaaatgcaaaggtt
tttcaactgagcaagtgtacagcgtgcacttttacccttgatcttcccgctgtccatttc
atgtgcatgcactcattccaccttcgttgccttggggataacgaaaaagaatgcccagaa
tgtgcacctgaatatagatctgttatggaggcaaagcagaagctagaacaaaatgctagg
gaccatgatctatttttccagcagttgaggggttcgaaggatggcttttctgtcatagca
gactattttagcaaaggcatagtgagtaagacaaccataccgcctgagaatggccgatag
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