Phragmites australis (common reed): 133924109
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Entry
133924109 CDS
T10575
Name
(RefSeq) zinc finger CCCH domain-containing protein 27-like
KO
K13192
RNA-binding protein 26
Organism
paua Phragmites australis (common reed)
Brite
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133924109
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
133924109
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133924109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133924109
NCBI-ProteinID:
XP_062225477
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Position
7:complement(19513126..19521652)
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AA seq
942 aa
AA seq
DB search
MHSSCELSAVLVTLKMLKESSSPALDADRIEVPSPMEENNSTNSEAATDTEDFEISDDDD
DRNHKHRKREARPQLDENTEEQHPGMPLKKRSRVSGNGQLFGGSGSQGEAQKDFVPKFKR
RPGAGTHTWAPRVNQSFRADSSASATARPPMTRGRGRNGAPWTQHDPRFNTFDMIDFASQ
MASQGPPAHPSLFMGTALPSGPYGFMPGMPHGILDPMHPLGMQRPIQPAVSPLIDLSMPR
QRCRDFEERGFCLRGDMCPMEHGVNRIVVDDMQSLSQFNLPVSVPNAQGLGIQNEGGTAS
VNLSSLGGSKGVPAKDVKSGVASDALKINGSTASAVAVAVADADVYDPDQPLWNNEQPEA
SCAGFVHTDAGVWNAESSGYETGREHSNQVFATDGLQSSKSTVWGRIAPKRKSVGGNTAK
TTLTNTTGNQRSDYDEMAPSTTQVKFAASKDTNGQSNSRIYGDVGRQSNRASHKASRTLY
VHGIPQESNRWEKLLSHFQKFGQVIDIYIPSNSEKAFVQFSKREEAEAALKAPDAVMGNR
FIKLWWANRDRIPDEGEGRISANSSQLSTTLANSAPQPSYPNKVKENVQSTTPRASSGSS
AEPSGSSTGPKMLPANSIKSIPPDPKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAK
QKGSSNSIKHAEAGGKEVVSNDASKVTDARSMNVRAEGSQEIAGKLEKKSSGELASHSQK
AVTSTQKSAAATKQTIHLLAPPQNRFKLDNRTTSFRILPPLPPEIANESTLADHFSSFGE
LSSVVLEDTEAHNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWLTASP
GSNNHSRPQKSSIPSKASSISGHIQSMSSESPSPVGKISSTATSGMAANPHNKSISTMEQ
TKTSPVGISKASCSSSSLSSNVECSPEHGATRNVVSDSDLPQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcattctagttgcgaactttctgctgtcttggtaaccttgaagatgctcaaagagtca
tcatctccagcattggatgctgacagaatagaagttccttcaccaatggaagaaaataat
tccacaaattctgaagctgctacagatactgaagacttcgaaattagtgatgacgatgat
gaccgtaaccacaagcaccgaaaacgggaggctagacctcaacttgacgagaatacagag
gagcaacatccagggatgcctctcaaaaagaggagcagggtttctggtaatggacaactt
tttggcggatctggttctcaaggtgaagcacagaaggattttgtaccaaaattcaagagg
cgtcctggagcaggaactcacacttgggcacctagagtgaaccaatccttccgagctgat
tcatcagcttctgccacggctcgccctcctatgacacgaggaagaggacggaatggtgca
ccctggactcagcatgatccaagatttaacacatttgatatgattgattttgcatcccag
atggcctcacaaggaccacccgcacatccgagcttatttatgggcactgcattgccaagt
ggtccatatggatttatgcctggaatgcctcatgggattttagatccaatgcacccactt
ggaatgcaacggcctattcagcctgcagtatctcctttaattgatcttagcatgcctcgt
caacgctgtagagactttgaggagcgtggattttgcttgagaggggatatgtgccccatg
gagcatggtgtaaatagaattgttgttgatgatatgcagagtctatctcaattcaatctt
ccagtatcagttccaaatgctcaaggactgggaatccaaaatgagggaggaactgcttct
gttaacttatcaagcctaggaggcagtaaaggtgttcctgcaaaagatgtcaaatctggt
gtggcaagtgatgcattaaagataaatggaagcactgcttcagctgttgctgttgctgtt
gctgatgctgatgtatatgatcctgatcagcctctgtggaacaatgaacaacctgaagca
tcatgtgctggttttgtacatactgatgctggagtgtggaatgctgaatcctcaggctat
gaaacagggcgggagcattcaaatcaggtttttgcaactgatggcttgcagagttcgaag
tctactgtttgggggcgaatagcaccaaagagaaaatcagtgggtggtaacacagctaaa
actacgttaacaaataccactggaaaccaaagaagtgattatgatgagatggctcccagc
acgacccaagtaaagtttgctgcttctaaggatactaatggccaatccaattcgagaata
tacggagatgtgggccggcaaagcaatcgagcttctcacaaagcatcccgtacactttat
gtacatggcattccccaagaaagcaacagatgggagaaacttctctcgcattttcagaag
tttggtcaagtaatagatatctatattccatctaacagtgaaaaagcttttgtccagttc
tcaaaaagagaagaggctgaagctgccctaaaagctccggatgctgttatgggcaaccgt
tttataaagctatggtgggccaacagagataggattcctgatgagggagagggtagaata
tccgcaaactcttcccagttgtctactacgctggccaattctgcccctcagccatcttat
cccaacaaagtcaaggaaaatgttcaatctacaactccaagggccagttctggatcttct
gctgaaccgtcgggttctagcacaggtcctaaaatgctgccagcaaatagtataaaatca
ataccccctgatccaaaaaggcaagaaagtctagaactattggaagaacttcgcaaaaaa
caggagatcttagctcagaagcgtgatgagttccgccgccagttagagaaacttgcaaaa
cagaaaggttcatcaaattcaattaagcatgcagaggctggtggaaaagaagttgtttct
aatgatgcgtcaaaagtaacggatgcaagatccatgaatgttagggctgaagggtcacag
gagattgctggtaagttggaaaagaaaagttctggagagttggcttcacactcgcaaaaa
gctgtgacatctacacaaaaatcagctgcagctacgaagcagactattcatctgttagca
cctccacagaataggtttaagcttgacaatcgaaccacatcattcagaattcttccacct
ttgccacctgaaattgcaaatgaatctaccttagcagatcatttctcatcatttggggag
ctttcgtctgttgttctggaagataccgaagcccataaccatgatgcaaccttaaaacct
tctctgagttgctcagcttgtgtgacttacacaacacggcaatcagctgagaaagcattt
attggtggtaaatcttgtaaagggcatacactacgatttatgtggttgacagcctctcct
ggctcgaataaccattctagacctcagaaaagttcaattccttccaaggcctccagtatc
tctggccatattcaaagcatgtcatctgagtcccctagcccggttgggaaaatctcatcc
actgccacatctggtatggcagccaatcctcataataaatccatctcaactatggaacaa
acaaagacttctccagttggaatttccaaagcttcatgttctagttcctctctatcatca
aatgttgagtgttctcctgaacatggtgccacaaggaatgttgtctcagattctgacctt
ccacaatga
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