Phragmites australis (common reed): 133924136
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Entry
133924136 CDS
T10575
Name
(RefSeq) calnexin homolog isoform X1
KO
K08054
calnexin
Organism
paua Phragmites australis (common reed)
Pathway
paua04141
Protein processing in endoplasmic reticulum
paua04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133924136
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133924136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
paua03110
]
133924136
04131 Membrane trafficking [BR:
paua04131
]
133924136
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
paua04091
]
133924136
Chaperones and folding catalysts [BR:
paua03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
133924136
Membrane trafficking [BR:
paua04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
133924136
Autophagy
ER-phagy
Other ER-phagy associated proteins
133924136
Lectins [BR:
paua04091
]
L-type lectins
133924136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CFAP143
Motif
Other DBs
NCBI-GeneID:
133924136
NCBI-ProteinID:
XP_062225523
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All DBs
Position
7:complement(20523153..20526395)
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AA seq
541 aa
AA seq
DB search
MVGGRALLSLLVSALLVQIRASDPLLYEPFDEDFEGRWVVSGKGEYQGAWKYAKSDGHED
YGLLVSEKAKKYAIIKELDQPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAGWDA
REFDNETPYTIMFGPDKCGSTNKVHFILKHKNPKTGKYVEHHLKSPPSVPYDKLSHIYTA
ILKPNNEVRILIDGEEKKKANFLSADDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPDA
VKPDDWDEDAPMEIEDKEAIKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKIDNP
KCEEAPGCGEWKRPMKQNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDFDPI
AAIGIEIWTMQDGILFDNILIADDEKVATSILEKTWKPKYEVEKEKEKAEEAAAGTDGLS
DFQKKIFDVLYKIADVPFLAPYKSKIIDVIEKGEQQPNMTIGILVSVAVVFVTVLFRILF
GGKKPVQAPVKPAAEAKKLKATETDDAGSSGDKEEKEGDTEEKEDDKDETAAPRRRSRRE
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagggcgcgcgctgctgtcgctgctggtctccgcgctgctcgtccagatccgc
gcctccgatccgctgctgtacgagcccttcgacgaggacttcgaggggaggtgggtcgtc
tctgggaagggcgagtatcaaggtgcttggaagtatgccaagagtgatggacatgaggac
tatggtctccttgttagtgagaaggccaagaaatatgccataatcaaagagcttgaccag
ccagttactttgaaggatgggacagtagtcctgcagtttgaagtgaggcttcagaatggt
cttgagtgtggaggtgcctatcttaagtacatccgccctcaggatgctggatgggatgcc
agggagtttgataatgagactccatacactattatgtttggtccagacaaatgtgggtca
acaaacaaggtgcatttcatccttaagcacaagaaccccaagactggcaagtatgttgaa
catcacctcaagtccccaccttctgtcccatatgacaagctctctcatatatacacggct
atcttgaagccaaacaatgaggtgagaattttgattgatggagaagaaaagaaaaaggca
aacttcctgtcagctgatgattttgagccagcacttatcccatcaaagaccattcctgat
cctgacgacaagaagccagaggactgggatgagagggctaaaatccctgatccggatgca
gtgaagcccgatgactgggacgaggatgccccaatggaaattgaggataaggaagccatc
aagccagagggatggttggatgatgagcctgaggagattgatgatccagaggctaccaag
ccggaagactgggatgatgaggaggatggagaatgggaggcgccaaagattgataacccc
aagtgtgaagaggcacctggatgtggcgagtggaagaggccaatgaagcagaaccctgct
tacaagggcaagtggcatgcacccctgattgacaaccctaactacaagggaatctggaag
cctcaggaaatccccaaccctgagtactttgagcttgacaagcctgactttgatccaatt
gctgctattggaattgagatctggacgatgcaagatggcatcctgtttgacaatattttg
attgctgatgatgagaaggttgccacctctatcctagagaagacctggaagcccaagtat
gaagttgagaaggaaaaggagaaggctgaggaggctgctgctggtacagatggtctttct
gacttccagaaaaagatctttgatgttctgtacaaaattgctgatgtcccgttcttggca
ccctacaagtccaagatcatcgatgtaatcgagaagggagagcagcagcccaacatgaca
attggaattttggtctcggtcgctgttgtctttgtgaccgttctctttaggatcctgttc
ggtggcaagaagcctgtgcaggctcctgtgaaacccgcagctgaggcgaagaagctcaag
gccacagagaccgacgatgctggaagcagcggcgataaggaggagaaagagggcgacaca
gaggagaaagaggacgacaaggacgagactgcagcgccacgccggaggtcccgaagggag
gcatag
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