Phragmites australis (common reed): 133924239
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Entry
133924239 CDS
T10575
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
paua03012
]
133924239
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133924239
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133924239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
HA2_C
Helicase_C
HA2_N
DSRM_DHX29
nSTAND3
AAA_19
dsrm
ATPase
NPHP3_N
NB-ARC
PhoH
DND1_DSRM
TsaE
T2SSE
Motif
Other DBs
NCBI-GeneID:
133924239
NCBI-ProteinID:
XP_062225670
LinkDB
All DBs
Position
7:complement(23470226..23495147)
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AA seq
1431 aa
AA seq
DB search
MAPKKKQPASKQKQKQKPPSSSSSAAAAAAPRLQISSENERRLRRLLLNSSATAAPVPAP
TDAPGARGESREQKARRLRGVYDKLALEGFSSAQIEQALSALSDSATFESALDWLCFNLL
GDELPLKFSSGTSGTTSGAGAEGSVKVLSTAKDNWVPQSREPEVVKGSTEGLEIRIGWRR
EEDVSLDDGRSSQAAWIRQYMEQQEEEDDANSNDSSTWEDHCSPTFEVVEAKPSRRKSKA
AKKNSKYGNSKEHTSHSAHSASSNSETAKVEGDHNDLEATENKSDSLVNIDEGSDLQKAI
PKDAGETCTKETEQEEVELDNLFFEDSSAWEAVAPEILKQQKIEKLSHDGYGHLLGNIDD
IWKKGDSGKMPKAILQKFCQKLGWEAPKYSKISEKDGKFVYAVNVLRGATGRGKSRKAGG
LTKILLPELDEEYGSVEEVQSRVAAFALYQFFADLPLRQLLTEPYSSLVLRWQEGELSST
SRVLDTEDSRRAGFVDMLLNMDADTDCTSQIGDTSAGGILVDSRNTEENKSVYKKRETTI
PSRTGSRSPEHAESAILKKQLEDKRKLPNYLKMLVARASLPIARQKKHFLQLLKENDVIV
VSGETGCGKTTQVPQFILDDMIESELGGYCNIVCTQPRRIAAISVAERVSDERCESSPGS
NDSLVGYQVRLDSARNEKTKLLFCTTGILLRKLSGNRDLSEVTHVVVDEVHERTILGDFL
LTVLKNLVEKRSNQQGRKLKVILMSATVDSSLFARYFGECPVITVEGRTHPVSTHFLEDV
YEEMEYCLELDSPASGAYFAQHGEKWKHASSSVNNRRGNKNLVLSSWGDESTLSEGYVNP
HYTSDCYKSYSERTNQNLKRLNEDVIDFDLLEDLICYIDENCPPGGAVLVFLPGVAEIDL
LIDRLSASVRFRGASSDWILPLHSLLGPSDQRKVFQSPPDNLRKVIVATDIAETSITIDD
VIYVVDTGKHKENRYNPRKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFES
VMRPFQVPEMLRMPLTELCLQIKSLHLGDIKSFLLKAVEPPNEEAISSAVDLLYKVGAFE
GHEELSPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFISPKDEKQNV
EKAKVALSNENLDVSSSTTDNKQSDHLLMVIAYDKWSRILLQNGAKSARQFCHSFYLNST
VMHTIRDMRLQFGTLLADIGLIDLPKDSLRPKDGRRKDILESWFSNMSLPFNMYARCAPA
IKSVICAGIYPNVAATLEGVDPGALGGRKPYDILFSKDRPRWYDGRREVHIHPSSVNHSL
KAVQYPFLVFLEKVETTKVFLRDTSIISPYSLLLFGGSMVIQHQIGVVVIDGWLRLAAAA
QTAVLFKQLRMTLDAVLKELIRKPEMATFVNNEVVRSIIHLLLEEDKAQQA
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagaagaagcagccggcctcgaaacagaagcagaagcagaagccaccctcc
tcctcgtcctccgccgccgccgcagccgcgccgcgcctccagatctcgtcggagaacgag
cgccgcctccgccgcctcctcctcaactcctccgccacagccgccccggtacccgcgccc
acagacgctccgggggcccgcggcgagtcgagggagcagaaggcgcggcggctgcgcggt
gtgtacgacaagctcgcgctcgagggcttctcctccgcgcaaatcgagcaggccctctcc
gctctatccgattcggcgacgtttgagtcggcgttggactggctgtgctttaatctgcta
ggcgacgagctccccctcaaattctccagcggcaccagcggcaccacctctggcgcagga
gctgagggttctgttaaggtactgtccacagccaaggacaattgggtaccacagagtcgt
gaacctgaggtggtgaaagggagcaccgaggggttggaaataagaattggttggcggcgg
gaagaggatgtatcattggatgacgggcgctcatcgcaagctgcatggattcggcaatac
atggagcaacaagaggaggaggatgatgcaaattctaatgattcctccacatgggaagat
cactgttcaccgacttttgaagttgtcgaagcaaagccaagtaggcggaagagcaaggct
gcaaaaaagaattccaagtatggaaactcgaaggaacatacaagccattccgcacattct
gcatcttcaaattcagaaactgcaaaggttgagggtgatcacaatgatttagaggcaact
gagaataaatctgacagtctagtcaatattgacgaaggatctgatttgcaaaaggcaatt
cctaaggatgccggtgaaacttgcacgaaggagacagaacaagaggaagtagagcttgat
aacctgttctttgaagactcatctgcttgggaggcagtggctccagaaatcttgaaacag
caaaaaatagagaaattatcacatgatggttatgggcatcttcttggaaacatagatgat
atatggaaaaagggagattctggtaaaatgccaaaagctattctacaaaaattttgtcag
aaacttggttgggaagctccaaagtatagtaaaatatctgagaaagatggtaaatttgtg
tatgctgttaatgtattgcggggtgctactggccgtggtaagagtcggaaggctggaggc
ttgacgaaaatcctgttacctgaactagatgaagaatatggatctgttgaggaagtgcaa
agtcgagtagcagcttttgctctatatcaattctttgctgaccttccactacgtcagttg
cttactgagccatactcatcacttgttttaagatggcaagaaggtgaattatcatcaaca
tcaagggtgctggatactgaggatagtcgaagagctggctttgtagatatgctattgaat
atggatgcagatacagattgtacatctcaaatcggagatacttctgctggtggcatattg
gtagattctaggaacactgaagaaaacaaatctgtctataagaagagagagactaccata
ccgagtcgtacgggatcgagatccccggagcatgcagagagtgcaattttgaaaaaacag
ttggaagataaaaggaagctaccgaattacttgaaaatgctggtagcaagagcttctcta
ccaattgctagacagaagaaacatttcttacaactgctgaaagagaatgatgtaattgtt
gttagtggagaaactggatgtgggaaaacaactcaggtgccacaatttattttggatgac
atgattgagtctgaacttggaggttattgcaatatagtttgcacacaaccccgtaggata
gcggccatttctgtggcggaaagagtgtctgatgaaaggtgtgaatcttcacctggatcg
aatgattcactggtcggatatcaagttcgtcttgatagtgcccggaatgagaagacaaag
cttttattctgtactactggtatccttcttagaaaattatctggaaacagagacttaagt
gaagttactcatgttgtagtagatgaagtacatgaacgtactattttgggtgatttcctg
cttactgttcttaagaatctcgttgagaaacgttctaatcaacaaggaaggaagttgaaa
gtgattctcatgtcggctactgttgattcaagcctatttgcacgttattttggagaatgc
cctgtgattactgttgaaggaaggacacatccggtgtcaacccacttccttgaggatgtt
tatgaggaaatggagtactgtcttgaattggattctcctgcatcaggagcatacttcgca
cagcatggagaaaagtggaagcatgctagcagctcagtgaataaccgacgaggaaacaag
aaccttgtcttatcctcatggggtgacgagtcaacgctttctgaaggctatgttaatcct
cattatacttctgactgctataagtcatacagtgaaagaaccaaccaaaatctaaaacgc
ttgaatgaagatgtgattgattttgatctgttggaagatttgatatgctatattgatgag
aactgccctcctggcggcgctgttctagtttttcttcctggagttgcagagattgacttg
ctgattgatagattatctgcttcagttagatttagaggggcatcatctgattggatcctc
cctttacattcgctgcttggaccctctgatcaaaggaaagtgttccaatctccaccagat
aacttacgcaaggttattgttgccacagacatagcagagacaagcattacaattgatgat
gtaatatatgtagttgatactggaaagcacaaggagaaccgttataacccacgcaagaaa
atgtcaagcatagtagaagattggatttctcgtgcaaatgcaaaacagagacgtggaagg
gctggtcgcgtgaagcccgggttatgtttctgtttgtatacaaggcatcgttttgaaagc
gttatgcgtccatttcaggtgcctgagatgttacgtatgcctttgactgagttgtgtctg
caaataaaatcacttcatttgggtgacatcaaatcattcttgctaaaggcagtagagccc
cctaacgaagaggctatttcctctgcagttgacttgttatacaaggttggagcatttgaa
ggacatgaagagttgtcacctcttgggtatcatttagcaaaactgcctgttgatgttttg
attggaaagatgatgctctatggtgctatctttggttgtttgtcaccaattctttctgtt
gctgctttcctgagttataaatccccatttatctctccaaaagatgagaagcaaaatgta
gagaaagcaaaagtagcattatcgaatgagaaccttgatgtatctagttctacaacagat
aataaacaatcagaccacctgctaatggtaattgcatacgacaagtggtcccggatactg
ctacagaatggagctaaatctgctcgtcagttttgccattcattctacttgaatagtaca
gtgatgcacacgatcagggacatgcgtcttcagttcggtacattgctagcagacattgga
cttatagatcttcctaaagatagtctgaggcctaaggatgggaggaggaaagacattctt
gagagttggttttctaatatgtcccttccattcaacatgtatgctcgctgcgccccagct
attaagtcggtcatatgtgcaggtatataccctaatgttgcagcaacattggagggtgtt
gatcctggagctctaggtggaaggaagccatatgatattctattcagtaaggaccgtcct
cgatggtatgatggaagacgagaagttcatatacacccatcatctgtgaaccatagcttg
aaagctgttcaatatccatttttggtgtttcttgaaaaggttgagacaaccaaggtgttt
ttacgtgatactagcatcatttccccctactcgctccttttgtttggtggttccatggta
atccagcatcagataggagtggttgttatagatggatggttgaggttggctgctgctgca
cagactgctgtcttattcaagcaacttcgaatgacacttgatgctgttctgaaagagttg
ataagaaagccggagatggcaacttttgtcaacaacgaagtggttagatccatcattcat
ttactgttagaagaagacaaggcccaacaagcatga
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integrated database retrieval system
