Phragmites australis (common reed): 133924438
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Entry
133924438 CDS
T10575
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133924438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133924438
04147 Exosome [BR:
paua04147
]
133924438
04090 CD molecules [BR:
paua04090
]
133924438
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133924438
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133924438
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133924438
CD molecules [BR:
paua04090
]
Proteins
133924438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_21
AAA_29
AAA_22
AAA_30
RsgA_GTPase
Zeta_toxin
AAA_24
nSTAND1
CoaE
Motif
Other DBs
NCBI-GeneID:
133924438
NCBI-ProteinID:
XP_062225944
LinkDB
All DBs
Position
7:26580280..26584834
Genome browser
AA seq
1255 aa
AA seq
DB search
MAGAKEKASFLELVRYADGRDRCLMALGVLGSFGDGMMQPLSMLVLGDIVNSYGGAGSAF
SSGAVDKFALRLLYVAVAVGACSFLEGLCWTRTAERQASRMRRLYLEAVLRQQVEFFDAA
APSSQATTFRVISTISDDADTIQDFLAEKLPNVLANMTLFFGSLAVSFVFAWRLALAGLP
FTLLFVVPSVLLGKRMVAAAGEARAAYEEAGGVAEQAVSSIRTVVAYGGEGQTLERFRRA
LARSTALGIKQGLIKGAVIGSMGVIYAVWSFMSWLGSLLVIHLHAQGGHVFVASICIVLA
GMSIMVALPNLRYFVDAATAAARMREMIDKLPPLEAAGKKGAVKEKIRGQIVFKDVHFSY
PSRPDTPVLNGVTLTISEGATIGLVGGSGSGKSTVVSLLQRFYSPDMGEILLDGHAIDTL
NVEWLRSQIGLVSQEPVLFATSIRENILFGNETASLKQVVAAAKMANAHDFITTLPHGYE
TNVGQFGTQLSGGQKQRIAIARALIRDPKILLLDEATSALDSESERAVQDALDRASVGRT
TITVAHRLSTIRKADMIAVLHAGRVVEYGTHDELVGVDGGECGVYARMVHMQKASLAREE
RHRVVEVEAESSRMSFQSVEIMSVVSSAHPSPVPSFRSVEHPVEDSELDRYHAKRDRKPS
QLRLLTMNRPEWKQALLGCAGAIIFGAVLPLYSYSLGSLPEVYFLGDDGLIRSKTRLYSL
VFLGIAIVCITANIVQHYNFAVMGERLTERVRGQMLAKILSFEVGWFDEDDNSSAAVCAR
LATQATKVRSLVGDRMCLLVQAAANATLGFSLAIAVSWRLAVVMMAMQPLIIASFYFKKV
LMTAMSMKAKKAQVQGSQLASEAVVNHRTITAFSSQRRMLRLYEAAQEGPRKDNRVQSWL
SGFCLSLCQFSNTGSMALALWYGGRLMAKGLITPTHLFQVFFMLMTMGRVIADAGSLTSD
LAQGGDVVRSVLDTLDREPMIKDDGDEVKESNRKREQKQKDINGAIEFRNVHFSYPTRPE
VAVLANFSLEIGAGKTVALVGPSGSGKSTVIGLVERFYDVQKGSVLIDGRDIKSYKLAHL
RSHVALVNQEPTLFSGTIRDNIMYGDEHATEDEVTNAAMLANAHEFISAMEGGYDARVGE
RGAQLSGGQRQRVALARAILKNARILLLDEATSALDAVSERLVQDAVDRMLQGRTCVVVA
HRLFTVQKSDTIAVVKNGKVVERGRHSELIAAGRGGIYYNLVKLQHDRSPSLSPM
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggccggggccaaggagaaggcgtcgttcctggagctggttcgctacgccgacgggcgc
gaccggtgcctgatggcgctcggcgtgctggggagcttcggcgacggcatgatgcagccg
ctctccatgctcgtcctcggggacatcgtcaacagctacggcggcgccgggagcgccttc
agctccggcgccgtcgacaagttcgcgcttcggttgctgtacgtcgcagttgcggtaggc
gcctgctccttcctagaggggctgtgctggacccggactgccgagcggcaggcatcgagg
atgcggcggctgtacctcgaggccgtcctgcggcagcaggtggagttcttcgacgccgcg
gcgccatcctcgcaggccacaacgttccgggttatctccaccatctccgacgacgccgac
accatccaagacttcctcgccgagaagctgccgaatgttctggccaacatgacgctcttc
ttcggctcgctggccgtgtccttcgtcttcgcgtggcggctggcgctggcgggcctcccg
ttcacgctcctcttcgtcgtgccgagcgtgctgctgggcaagcgtatggtcgccgcggcg
ggggaggcccgcgcggcgtacgaggaggccggcggcgtcgccgagcaggcggtgtcgtcc
atccgcacggtggtggcgtatggcggggaggggcagacactggagcggttcaggcgcgcg
ctggcgcggagcacggcgctcggcatcaagcaggggcttatcaagggagccgtcatcggg
agcatgggcgtcatctacgccgtctggtccttcatgtcgtggctcggcagcctactggtc
attcacttgcacgcgcagggcggccacgtcttcgtcgcctccatctgcatcgtcttggcg
ggaatgtccatcatggtggcgctgccaaacctgcggtacttcgtcgacgccgcgacggcg
gcggcgcggatgcgcgaaatgatcgacaagctgccgcctctcgaagcggccggcaagaag
ggcgccgtcaaggagaaaatcaggggccagatcgtgttcaaggacgtgcacttctcgtac
ccatcgaggccggacacgccggtgctcaacggcgtgaccctgaccatctccgagggcgct
accattggcctcgtaggcgggagcgggtccgggaagtcaaccgtggtctccttgctgcag
aggttctacagcccggacatgggcgagatattgctggacggccatgccatcgacacgctc
aacgtggagtggctcaggagtcagataggcctggtgagccaggagccagtgctgttcgcc
acgtccatcagggagaacatactgttcggcaacgagacggcgtcgctgaagcaagtcgtt
gcggcggcgaagatggccaatgctcatgacttcatcaccacattgccccatggatacgaa
accaatgttgggcaattcgggacgcagctgtctggagggcaaaagcagcgcatcgccatc
gctcgcgcgctcatccgggaccccaagatcctgctcctggacgaggcaaccagcgcgctg
gactccgaatcggagcgcgcagtgcaggatgcgcttgaccgggcgtctgtgggccggaca
accatcaccgtagcgcaccgcctctcaacaatccgtaaggctgacatgatcgcggtactc
cacgcgggccgcgtggtggagtacggcacgcacgacgagctcgtcggcgtggacggcggc
gaatgcggggtctacgccaggatggtgcacatgcagaaggcgtccctggccagagaggaa
cgccaccgcgtggttgaagtagaagcggagagcagcaggatgtcgttccagagcgtcgag
atcatgtccgtggtcagcagcgcccatccaagcccggtgccgtcgttccggtcggtcgaa
cacccagtggaagacagcgagctcgaccgctaccatgcaaagcgcgaccgcaagccgtcg
cagctccgcttgctcacaatgaatcggccagagtggaagcaagctctgctcgggtgcgcc
ggcgcgatcatattcggcgcggtactgccgctgtactcctacagcctcggctcgttgccg
gaggtgtatttcctcggcgacgatggcctcatccgttcgaagaccaggctgtactccctt
gtcttcctcggcattgccatcgtctgcatcactgcgaacatcgtgcagcactacaacttc
gccgtgatgggcgagcgcctgacagagcgcgtccggggacagatgctcgccaagatcctt
tccttcgaggtcgggtggttcgacgaggacgacaactcgagcgcggcggtctgtgcgcgt
ttggcgacgcaggcgaccaaggtccgctccctcgtcggcgaccgcatgtgcctcctggtg
caggcggccgccaacgcgacgctgggattctctctggcaatcgccgtgtcgtggcggctc
gcggtggtcatgatggccatgcagccgctgatcatcgcaagcttctatttcaagaaggtc
ctcatgacggccatgtccatgaaggccaagaaggctcaggtgcagggtagccagctcgcc
agcgaggccgtggtgaatcatcggaccatcaccgcgttctcgtcacagcggcggatgctc
cgcctgtacgaggcggcgcaggaggggcccaggaaggacaatagggtgcagtcctggctc
tccggcttctgcctgtccctgtgccagttcagcaacacgggcagcatggcgcttgctctg
tggtacggaggcaggctcatggccaaggggctcatcactcccacacacttgttccaggtg
ttcttcatgctcatgaccatgggaagggtgatcgccgacgccgggagcttgacgtccgac
ctagctcagggaggtgacgtcgtgcggtccgtccttgacacgctggaccgtgaaccgatg
atcaaggacgacggtgacgaagtcaaagagtcaaacaggaagagggaacagaagcagaag
gacatcaatggcgccatcgagttcagaaatgtgcatttcagctacccgacgcggccagag
gtggccgtgctcgccaacttcagccttgagataggcgcggggaagacggtggcgctcgtc
gggccgagcgggtccggcaagtccacggtgatcggcctggtcgagcgtttctatgacgtg
cagaaaggctcggttctgatcgacggcagggacatcaagagctacaaactggcacacctc
cggtcgcacgtcgcgcttgtcaaccaggagccgacgctattctccggcacgatacgcgac
aacatcatgtacggcgatgagcacgccaccgaggacgaggtgaccaacgccgccatgctt
gccaacgcccacgagttcatcagcgcaatggagggcggctacgacgcgcgcgtcggggag
cgaggggcacagctgtcgggcgggcagaggcagcgggtagcgctggcgcgtgcgatactc
aagaacgcgaggatcctgctgctggacgaggcgacgagcgcgctggacgccgtgtcggag
aggctggtgcaggacgccgtcgacaggatgctgcaggggaggacgtgcgtcgtcgtggcg
caccgcctcttcacggtgcagaagtccgacacgatcgcggtggtgaagaacgggaaggtg
gtggagagaggacggcacagcgagctcatcgccgcaggacgtggagggatatactacaac
ctggtcaagctgcaacacgacagatcaccgtcccttagtcctatgtga
DBGET
integrated database retrieval system
