Phragmites australis (common reed): 133924446
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Entry
133924446 CDS
T10575
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
paua Phragmites australis (common reed)
Pathway
paua03022
Basal transcription factors
Brite
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133924446
Coactivators
SAGA/TFTC/STAGA complex
133924446
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133924446
STAGA complex
133924446
TFTC complex
133924446
SAGA complex
133924446
SLIK complex
133924446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133924446
NCBI-ProteinID:
XP_062225959
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Position
1:complement(48988659..48993693)
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AA seq
554 aa
AA seq
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MADPPPVAASASPQPDQIAAASASTPQNPNPNPLLSPQIPPSPTVSDLSAHISSPQQLDP
SAAAASGGGSTDFPPRPPQLQAPSPTQAATGAGGFGHQIHRSGSVSRLSTASQLPQYAAM
AARMYGGQMSFSGGGGQVGQQQQQQLAARAAMLGQGQLGMLQGQGNAASATHFGLQSQMM
VQPRQKGMVQGTQLNTSNAAQALQGMQPMGVMGTLGMNQIRPNGTIPYGAQQRFAHAQMR
PQQASQQAALSPQKVAAQGLSRTAPIAALNSQLPGSLQNGQMVAMSMPQQQQHQWLKQMQ
SSMASPISPQHQYQQQQRLLLMQQLQQKTGLSPQQIAQFQQQHPHLNAQQLMQQQHFLQQ
FQQQQPQQSPRISASGSQKSANLSGSQPGTPLSGGTMTGGSVSQGAEGTSQLLGKRKIQD
LVAQVDPQGKVDPDVEDLLLEIADDFIDSVTAFACTLAKHRKSSVVEAKDVLLHLERNWH
LSVPGFSREDNNPQKNPVKPLVDPQQPESDAAGIRGTNNKLITNNSAGNHQIRSQVAEPS
PMQTMGPLSKVPRF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgccgcccgtggccgcctccgcctcgccgcagcccgaccagatcgccgcg
gcctccgcatccaccccgcagaaccccaaccctaaccccctcctctcccctcaaatcccc
ccgtccccaaccgtctccgatctctccgcgcacatctcctccccgcagcagctcgacccg
tccgcggcggctgcttccggaggcggatccacggacttcccgccgcggccgccgcagctg
caggcgccctcgcccacgcaggcggcgaccggcgccgggggcttcggccaccagatccat
cgctcggggtcggtctcccgcctttctaccgctagccagctcccgcagtacgccgcgatg
gcggctaggatgtacggcgggcagatgagcttctcgggcggcggagggcaggtgggccag
caacaacagcagcagctggcagcgcgcgcggccatgcttgggcagggccagttggggatg
ctgcaaggccaggggaacgcggcatctgcgacgcatttcgggcttcagtcgcagatgatg
gtgcagccaaggcaaaagggcatggtacaaggtacacaacttaatacttctaatgcagct
caagcattgcaagggatgcagcccatgggagtcatgggtactttggggatgaaccagatc
agaccgaatggtactattccctatggtgctcaacaacggtttgcccatgcgcaaatgagg
ccacagcaagcatctcagcaagcggcactatctccacagaaggtagctgctcaaggcttg
tcgagaacagcacctattgcagcattaaattcacaactacctggatcattgcaaaatgga
cagatggtggccatgtctatgcctcagcaacagcagcatcaatggttgaagcaaatgcaa
tcatcgatggcctcaccaatttctccacaacatcaatatcagcagcaacagaggttgttg
ttgatgcagcaacttcagcagaagacaggattgagcccacaacagattgcacaattccaa
caacagcatccacatctcaatgcccaacagctgatgcagcagcaacattttctacagcag
tttcagcagcagcaaccacaacaatctccaaggatttcagcctctggttcacagaagtct
gcaaacctttcaggatcacagccgggtacacctttgtcaggtggaactatgactggtgga
agtgtaagtcagggagcggaaggaactagccaacttcttgggaaaagaaaaatacaagat
ctggttgcgcaggtggatccccaaggcaaggttgaccctgatgtggaagacttactttta
gagattgctgatgatttcatcgactcggtgactgcatttgcttgcaccttggcaaagcac
aggaaatcatcagttgtggaagccaaggatgtgttgctgcacttagaaagaaattggcat
ttgtctgttcctggtttctcaagggaggacaataatcctcaaaaaaatcctgtaaagcca
ttggtggatccccaacagccggaaagtgatgctgctggtattagaggcacaaacaataaa
cttattactaataattcggctggcaaccatcaaataagatctcaggttgcagagccttca
ccgatgcagacaatgggccctctgtcgaaagtgcctcgtttctaa
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