Phragmites australis (common reed): 133924515
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Entry
133924515 CDS
T10575
Name
(RefSeq) eukaryotic translation initiation factor-like
KO
K03260
translation initiation factor 4G
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133924515
03012 Translation factors [BR:
paua03012
]
133924515
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133924515
mRNA cycle factors
Stress granule specific factors
133924515
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
eIF-4
133924515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
DUF5998
Motif
Other DBs
NCBI-GeneID:
133924515
NCBI-ProteinID:
XP_062226075
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All DBs
Position
7:complement(27496932..27502772)
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AA seq
784 aa
AA seq
DB search
MQSDQPVISLRPGGGGAGPRAGRLFSPAFAAAAGSGDFLRPHGGVASGISKIGDLHLEPR
PRVRYTRDQLLELREIADVSEDILRIKQEIDVEFHGEDQSWVRNDSIVQGQTQMQTQTQT
QNRYAETDNRDWRARSTPPPAVIEEKSWDNIREAKESYVSSGRQQEQVNRNDQLSSQFSS
KAQVGPTPALIKAEAPWSARRGNLSEKDRVLKTVKGIMNKLTPEKFDLLKGQLIEAGITT
ADILKDVILLIFEKAVFEPTFCPMYAQLCADLNDKLPSFPPEEPDGKDITFKRVLLDNCQ
EAFEGADSIRADIAKLTGPDQEIDRRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHI
VKELLGAGPDKKPCPEEENVEAICHFFNTIGKQLDENPKSRRINDTYFIQMKELTTNPHL
APRLRFMVRNVVDLRSNNWVPRREEIKAKTISEIHSEAEKNLGLRPGAAAVIRNGRNAPG
GPLSPGGFPMNRPGTGGMMPGMPGSRKMPGMPVLDNDNWEVPRSKSMPRGNQNPLLNKPS
SINKPSSINTRFLPQGSGASLMGKSALLGTSGPPSHTSSSTPGPIQTPAQTTVAPKPAPV
VAPVPDKPASAPKGVSADLQKKTVALLEEYFGIRILDEAQQCIEELQSPGYYPEIVKEAI
NLALDKGDSFVDPLVRLLEHLYTKNIFKAEDLESGCLLYGSLLDDIGIDLPKAPTQFGEI
IAHLILSCRLRFEAVEEILKKMEDTFFRKPIFNAVTKTLGANPSGQAILVSHSAVINACN
SLLE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggatcagcctgtgatcagcttgcggcccggcggcggcggcgccggtccgcgc
gccggccgcctcttctcccccgcattcgccgccgccgctggctccggagacttcctccgc
ccgcacggcggggtagcctccggcatctccaagattggtgatttgcatttagagccacgc
cctcgtgttcgttatacaagagatcaacttcttgagctgcgtgagattgctgatgtatct
gaggacattttaaggatcaagcaagagattgatgtagaatttcatggtgaagatcagagc
tgggttcgcaatgattcaattgtgcaagggcaaacacaaatgcaaacccaaacacaaacg
caaaatcggtatgctgagacagataatcgtgattggcgcgcacgctcaacaccacctcct
gcggttattgaagagaagtcgtgggacaatattcgtgaagctaaagaatcctacgtttca
agtggtaggcagcaagagcaagttaacaggaatgatcagttaagctcccagttttcttca
aaagctcaggttggccctacccctgcgcttatcaaggcggaagcaccttggtcagcccga
agaggcaatctttcggagaaagatagagtcttgaaaacagttaaaggtattatgaacaaa
cttacgccggagaaatttgatctactgaagggccaattaatcgaagctggaatcacgact
gctgatatcttgaaggatgttattttgctcatatttgagaaggctgtttttgagcccacc
ttctgtccgatgtatgctcagctttgtgctgatctcaatgataagctcccatcatttcct
cccgaagaaccagatggtaaagatattacgttcaaacgtgtgctgttggacaattgtcag
gaagcctttgaaggtgcggacagcataagggctgatattgcaaaattgactggccctgac
caagaaatagacagaagggacaaagagcggctggttaaattgagaacacttggaaatatt
cgacttatcggtgagctactcaagcaaaaaatggttcctgagaagatagttcatcacatt
gtcaaggaattgctgggtgctgggcctgataagaagccatgccctgaagaggaaaatgtc
gaggctatctgtcatttcttcaatacgattggtaaacagcttgatgaaaacccaaagtct
cgacgaattaacgatacctacttcatccagatgaaggagctaaccacaaaccctcatctc
gcaccacgattgaggttcatggtccgtaatgtggtggatctccgatcaaataactgggtc
cctcgtcgtgaggagattaaggccaagacgatcagtgaaattcactcagaggctgaaaag
aatcttggattacgacctggagctgcagcagtaattaggaatggacgtaatgcaccaggt
gggcccctttcgcctggaggttttccaatgaaccgtccaggaaccggaggcatgatgcct
gggatgcctgggtcaagaaagatgcctggaatgcctgtattagataatgataactgggaa
gttcctcgttctaaatcaatgccaagaggcaaccagaacccgctgcttaataagccatca
tcaataaacaagccatcatctattaacaccaggtttcttcctcaaggcagtggagcatca
cttatgggcaagagtgcacttttgggcactagtggcccgccatcccatacttccagctct
acacctggtccaattcagacaccagctcaaactacagtagcaccgaaaccagctccagtc
gtggcacctgttcctgataaacctgccagtgctcccaagggggtctccgctgaccttcag
aagaaaacagtagctcttcttgaggagtatttcggtatacgtattttagatgaagcacaa
caatgtatcgaggagttgcagagtcctggttattacccagaaattgttaaagaagctatc
aatcttgcactagataaaggtgacagttttgttgatcctcttgttaggctattggagcat
ctgtacacaaagaacatttttaaggctgaagacctggaaagcggatgcttgctatatggc
tccctgctggatgatattggtattgaccttcctaaagctccaacacagtttggtgaaatt
attgctcatctgattctgtcgtgccgcttgagatttgaagctgttgaggagattttaaag
aaaatggaggataccttcttccggaaaccaatttttaacgctgtcacgaaaaccttggga
gcaaacccatcaggtcaggctatcttagtctcacactctgctgtcatcaacgcatgcaac
agccttttggaataa
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